PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019158202.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 247aa MW: 29179.5 Da PI: 8.4627 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 109.9 | 2.9e-34 | 4 | 121 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 ++FhP+deel+ ++L +k+ ++++++ ++i e+d k++Pwd+p ++++e++ew+fFs++d + rat sgyWk+t kd e+++ +++ XP_019158202.1 4 LKFHPSDEELIIHHLWRKIGNSSFST-SAIGEAD-RKLDPWDFPaFSLQGERREWFFFSHKDWMN----GIYRATYSGYWKTTEKDAEIFK-GKA 91 79*********************999.88***99.69*******668888999*******99976....4799******************.99* PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 l g+k+t+vfy+gr pk +kt+W+mheyr XP_019158202.1 92 LLGMKRTMVFYQGRIPKITKTNWFMHEYRS 121 ****************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MDSLKFHPSD EELIIHHLWR KIGNSSFSTS AIGEADRKLD PWDFPAFSLQ GERREWFFFS 60 HKDWMNGIYR ATYSGYWKTT EKDAEIFKGK ALLGMKRTMV FYQGRIPKIT KTNWFMHEYR 120 SESNHEWVIC KVFLIENKME EISGICSSEE SKPSSMMQTN SKDTTGLLVK LKYKEDTVKF 180 VLNNPTMDGL KTQVLKRFNK LDTHALKFKY RDLEREMITI ICDEDLQLCF QSFKSFARIE 240 VTNSQCH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39610.1 | 2e-44 | NAC family protein |