PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019158200.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 256aa MW: 29932.4 Da PI: 8.3075 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 110.5 | 1.9e-34 | 4 | 122 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 ++FhP++eel++++L +k++++++++ +i+e+d k++Pwd+p ++++ e+kew+fFs+rd + r+t sgyWk+tgkd+e+++ ++ XP_019158200.1 4 LKFHPSEEELITHHLWRKMDNRSFSI-PAIDEAD-RKLDPWDFPgVSFQQgERKEWFFFSPRDWMN----GIYRVTYSGYWKTTGKDTEIFK-GK 91 79*********************999.7799999.69*******7565552556********9986....4799******************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +l g+k+t+vfy+g+ pk +kt+W+mheyr XP_019158200.1 92 ALLGMKRTMVFYQGKIPKITKTNWLMHEYRS 122 *****************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MDSLKFHPSE EELITHHLWR KMDNRSFSIP AIDEADRKLD PWDFPGVSFQ QGERKEWFFF 60 SPRDWMNGIY RVTYSGYWKT TGKDTEIFKG KALLGMKRTM VFYQGKIPKI TKTNWLMHEY 120 RSESNHEWVI CKVFLMENKM EEISGICSSE ESKPSSMMQT NSISTQAPQP QDTTGLLVKL 180 KYKEDTVKFV LNNPTMDGLK TQVLKRFNKL DTHALKFKYR DLGGEMITII CDEDLQLCLQ 240 SFKSFGRIEV TMSLAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39610.1 | 4e-42 | NAC family protein |