PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157796.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Nin-like

Protein Properties

Length: 514aa MW: 57648.7 Da PI: 6.7442

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157796.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	46.2	9.2e-15	342	386	4	46
RWP-RK 4 eisledlskyFslpi..kdAAkeLgvclTvLKriCRqyGIkRWPh 46 i+ ++l++ ++ + dAAk+L+v++++LKr+CR++GI+RWP XP_019157796.1 342 GITRQVLEQLLHKRLsrDDAAKTLKVSTSTLKRACRNFGIPRWPN 386 6888999999987773369*************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MTILEDNTEL FHVHNLLVDM TGGMMVSPPR MNSSLPSGAS PGAEQSELRT EVDAAALGKN 60 QALEGTVHQI SGSHRQRNDD RFVNLEDLFV DALFHMPIQS PADMAGGMMV SPIRMNSSLP 120 LDDSPGNFDP VVIPGGNEEV QVLQTWRKMM QATCKQRCFE VETPFVVCSI RHLQKMVAEL 180 RNGEEILWLT GKQAYVELEL NFSSEKKGND VSLWLALEPE SSGGMMEHNS MVCLERTFLG 240 RFDRAFLRSL EGLLDHFIVY FLKAGVKLWN GRGSKLWHLE VGNANCRGEM IQHQQDSSCE 300 GKIPESSATN EGREAVGLDG IDAKANSSKK NDTICRWQKD HGITRQVLEQ LLHKRLSRDD 360 AAKTLKVSTS TLKRACRNFG IPRWPNHNRK RPNSSLNQKQ ADKKPKGTQS CPALPPAEAT 420 TTTLQANSVM SMKVTYKNDT IRFPLSSSAS TMKYLEEQLE TKFKISLENM SIKYQDEEDE 480 WITLTCDSEL MHGLDVLRSC GKTVIRMIIT PKFD

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MTILEDNTEL FHVHNLLVDM TGGMMVSPPR MNSSLPSGAS PGAEQSELRT EVDAAALGKN  60
QALEGTVHQI SGSHRQRNDD RFVNLEDLFV DALFHMPIQS PADMAGGMMV SPIRMNSSLP  120
LDDSPGNFDP VVIPGGNEEV QVLQTWRKMM QATCKQRCFE VETPFVVCSI RHLQKMVAEL  180
RNGEEILWLT GKQAYVELEL NFSSEKKGND VSLWLALEPE SSGGMMEHNS MVCLERTFLG  240
RFDRAFLRSL EGLLDHFIVY FLKAGVKLWN GRGSKLWHLE VGNANCRGEM IQHQQDSSCE  300
GKIPESSATN EGREAVGLDG IDAKANSSKK NDTICRWQKD HGITRQVLEQ LLHKRLSRDD  360
AAKTLKVSTS TLKRACRNFG IPRWPNHNRK RPNSSLNQKQ ADKKPKGTQS CPALPPAEAT  420
TTTLQANSVM SMKVTYKNDT IRFPLSSSAS TMKYLEEQLE TKFKISLENM SIKYQDEEDE  480
WITLTCDSEL MHGLDVLRSC GKTVIRMIIT PKFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	1e-11	Nin-like family protein