PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157795.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Nin-like

Protein Properties

Length: 692aa MW: 77268.7 Da PI: 5.8474

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157795.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	45.6	1.4e-14	520	564	4	46
RWP-RK 4 eisledlskyFslpi..kdAAkeLgvclTvLKriCRqyGIkRWPh 46 i+ ++l++ ++ + dAAk+L+v++++LKr+CR++GI+RWP XP_019157795.1 520 GITRQVLEQLLHKRLsrDDAAKTLKVSTSTLKRACRNFGIPRWPN 564 6888999999987773369*************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MRLVETDDAS LLIDPSAENL ASPGLAEQAQ PPPYAASPFP TRSLYNHGGL TWNPVTEMGT 60 AENAAAAALT ESKMSEEGET SVFHHLQTDS DNHSVSTECD LLFEMAGGMI MSPQRPRMNF 120 SGEEALFLTP YLHTDMGMGG GMMMSMSPSR MNYFSPPSGD SIGNSDPFRL GGGMMMSMSP 180 PRMNYFSPPS GDSDPFRLWN FADHSESQEL ENRKGMMMRP TWKQQPCIEV DAAALGKNQA 240 LEGTVHQISG SHRQRNDDRF VNLEDLFVDA LFHMPIQSPA DMAGGMMVSP IRMNSSLPLD 300 DSPGNFDPVV IPGGNEEVQV LQTWRKMMQA TCKQRCFEVE TPFVVCSIRH LQKMVAELRN 360 GEEILWLTGK QAYVELELNF SSEKKGNDVS LWLALEPESS GGMMEHNSMV CLERTFLGRF 420 DRAFLRSLEG LLDHFIVYFL KAGVKLWNGR GSKLWHLEVG NANCRGEMIQ HQQDSSCEGK 480 IPESSATNEG REAVGLDGID AKANSSKKND TICRWQKDHG ITRQVLEQLL HKRLSRDDAA 540 KTLKVSTSTL KRACRNFGIP RWPNHNRKRP NSSLNQKQAD KKPKGTQSCP ALPPAEATTT 600 TLQANSVMSM KVTYKNDTIR FPLSSSASTM KYLEEQLETK FKISLENMSI KYQDEEDEWI 660 TLTCDSELMH GLDVLRSCGK TVIRMIITPK FD

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MRLVETDDAS LLIDPSAENL ASPGLAEQAQ PPPYAASPFP TRSLYNHGGL TWNPVTEMGT  60
AENAAAAALT ESKMSEEGET SVFHHLQTDS DNHSVSTECD LLFEMAGGMI MSPQRPRMNF  120
SGEEALFLTP YLHTDMGMGG GMMMSMSPSR MNYFSPPSGD SIGNSDPFRL GGGMMMSMSP  180
PRMNYFSPPS GDSDPFRLWN FADHSESQEL ENRKGMMMRP TWKQQPCIEV DAAALGKNQA  240
LEGTVHQISG SHRQRNDDRF VNLEDLFVDA LFHMPIQSPA DMAGGMMVSP IRMNSSLPLD  300
DSPGNFDPVV IPGGNEEVQV LQTWRKMMQA TCKQRCFEVE TPFVVCSIRH LQKMVAELRN  360
GEEILWLTGK QAYVELELNF SSEKKGNDVS LWLALEPESS GGMMEHNSMV CLERTFLGRF  420
DRAFLRSLEG LLDHFIVYFL KAGVKLWNGR GSKLWHLEVG NANCRGEMIQ HQQDSSCEGK  480
IPESSATNEG REAVGLDGID AKANSSKKND TICRWQKDHG ITRQVLEQLL HKRLSRDDAA  540
KTLKVSTSTL KRACRNFGIP RWPNHNRKRP NSSLNQKQAD KKPKGTQSCP ALPPAEATTT  600
TLQANSVMSM KVTYKNDTIR FPLSSSASTM KYLEEQLETK FKISLENMSI KYQDEEDEWI  660
TLTCDSELMH GLDVLRSCGK TVIRMIITPK FD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	1e-11	Nin-like family protein