PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157792.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Nin-like

Protein Properties

Length: 787aa MW: 87964.3 Da PI: 4.845

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157792.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	49.3	9.7e-16	604	649	3	48
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 + i+l +l++ F ++ +AAk+L+v+ ++LKr+CR +GI+RWP k XP_019157792.1 604 HGITLPVLEQLFGKSRDNAAKTLKVSSSTLKRACRDFGINRWPNHK 649 5799***************************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 787 aa Download sequence
MRVVENDDAS SFIDPSADNF PSPEQAQPPP YAASPFPTRW LFNHGGLTWN PVTEMETADN 60 DAAAAAALTE SEMSEEGETT SVVHHLQTDS HNHSVNTECN LVLDMAGGMM MSPPGPGIGM 120 NFSGEEALFL SPNFHADMGG GMMMSMSPPW INYFSLPSGD SMGNFDPFRL CDFADHSEVQ 180 ELENRNGMMM RPTWKQQPCI EEVDAASASA LGQNQSLGIW SAALEEEAEN MGGMVQPQTS 240 DDHSVNNVDA WFQLAGLSSQ TMINYSLPSD DSGSLGGNKP GLPGVTPCLI IVEWLYKKIV 300 IHSQSIELKI WGCIMGWISL SQRLWFECCS NPHLWRLVLG FLDVVVTLLL HIETNNYSFG 360 NSVTDDRSSS SLNAKMLRLL YLNGLDRQFL DHFDRLVQTG VLELPSGEEI KLPYLQEEEE 420 VGTASQKNHS VSILPEMLEP KCWMMQLDSP CEFHIPKSSA TNEERNVVVG LKRTDAIGKS 480 WKRKGFFWWL KDHGISHKIL ESLFVRRSTF KQAHRDFGIT RRSLEEVGTA SEENHTADIW 540 PALEAEYNAA RRGGMLLEQE DSSSEAHIPE SNATNEERNN SIDAKGGNSS SQKTDTISRW 600 EKNHGITLPV LEQLFGKSRD NAAKTLKVSS STLKRACRDF GINRWPNHKG KMPNCSLNQI 660 QYVQAVKKCK GIQPCPALPP LQATNTSQCN STMSVKVTYK NDTIRFPLSS SSTLKYLEEQ 720 LESKFKISLE NMSIKYQDEE DEWITLMCDS GLMHGLDVLR SCGKTIIRMM VTPKLDYPWM 780 EDYILPL

Sequence ? help Back to Top

Protein Sequence Length: 787 aa Download sequence

MRVVENDDAS SFIDPSADNF PSPEQAQPPP YAASPFPTRW LFNHGGLTWN PVTEMETADN  60
DAAAAAALTE SEMSEEGETT SVVHHLQTDS HNHSVNTECN LVLDMAGGMM MSPPGPGIGM  120
NFSGEEALFL SPNFHADMGG GMMMSMSPPW INYFSLPSGD SMGNFDPFRL CDFADHSEVQ  180
ELENRNGMMM RPTWKQQPCI EEVDAASASA LGQNQSLGIW SAALEEEAEN MGGMVQPQTS  240
DDHSVNNVDA WFQLAGLSSQ TMINYSLPSD DSGSLGGNKP GLPGVTPCLI IVEWLYKKIV  300
IHSQSIELKI WGCIMGWISL SQRLWFECCS NPHLWRLVLG FLDVVVTLLL HIETNNYSFG  360
NSVTDDRSSS SLNAKMLRLL YLNGLDRQFL DHFDRLVQTG VLELPSGEEI KLPYLQEEEE  420
VGTASQKNHS VSILPEMLEP KCWMMQLDSP CEFHIPKSSA TNEERNVVVG LKRTDAIGKS  480
WKRKGFFWWL KDHGISHKIL ESLFVRRSTF KQAHRDFGIT RRSLEEVGTA SEENHTADIW  540
PALEAEYNAA RRGGMLLEQE DSSSEAHIPE SNATNEERNN SIDAKGGNSS SQKTDTISRW  600
EKNHGITLPV LEQLFGKSRD NAAKTLKVSS STLKRACRDF GINRWPNHKG KMPNCSLNQI  660
QYVQAVKKCK GIQPCPALPP LQATNTSQCN STMSVKVTYK NDTIRFPLSS SSTLKYLEEQ  720
LESKFKISLE NMSIKYQDEE DEWITLMCDS GLMHGLDVLR SCGKTIIRMM VTPKLDYPWM  780
EDYILPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	4e-13	Nin-like family protein