PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019157746.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 309aa    MW: 34927.6 Da    PI: 6.2619
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019157746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.79.5e-49451712128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     ppG+rF P deel+ +yL+ kv +++l+  + i+ev++yk+ Pw+L  + ++ +ekewyfF++rd+ky++g+r+nra+ sg+Wkatg dk++++k
  XP_019157746.1  45 PPGYRFCPLDEELIRCYLQLKVLNEPLPP-NKIHEVNLYKFSPWELSvMYTSIGEKEWYFFTPRDRKYKNGQRPNRAAGSGFWKATGADKPIKNK 138
                     9*************************999.77**************9556667999*************************************** PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++ +vg +k Lvfy+gr pkg kt+W+mheyr+
  XP_019157746.1 139 QKVVVGYRKALVFYEGRPPKGDKTNWIMHEYRV 171
                     *******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MEGKFHVPTP KTKSVVGASS DIAIVHGENK IVVHDNNNND FFEFPPGYRF CPLDEELIRC  60
YLQLKVLNEP LPPNKIHEVN LYKFSPWELS VMYTSIGEKE WYFFTPRDRK YKNGQRPNRA  120
AGSGFWKATG ADKPIKNKQK VVVGYRKALV FYEGRPPKGD KTNWIMHEYR VEGAPSPRPQ  180
AGDANDMRLD DWVLCRIYEK GAGKLPSKSS PKTSPAPKTQ AVLEPVAAEQ PPVVSAAPPQ  240
IEQGMVIHDE AVPQFSYLPD LQDNELMASS FYLYPMGFDD AFANEPFPVG MGSLYITDND  300
RCSNQDFME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.18e-61NAC family protein