PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157434.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 410aa MW: 45952.2 Da PI: 5.0008

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.4	7.7e-55	28	156	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdee++ +yL +kv+++ + + +i evd++kvePwdLpkk+k +ekew+fF++rd+ky+tg r+nrat+sgyWkatgkdke+++ XP_019157434.1 28 LPPGFRFHPTDEEIILHYLLHKVSNNGFVA-IAIGEVDLNKVEPWDLPKKAKMGEKEWWFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIFKG 121 79***********************988.88***********99999************************************97 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++l+g+kktLvfy+grapkgek++Wvmhe+rle XP_019157434.1 122 kSNSLIGMKKTLVFYRGRAPKGEKSNWVMHEFRLE 156 46667*************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
METFETGKEA LVAHGDENER DKDDLLGLPP GFRFHPTDEE IILHYLLHKV SNNGFVAIAI 60 GEVDLNKVEP WDLPKKAKMG EKEWWFFCQR DRKYPTGMRT NRATESGYWK ATGKDKEIFK 120 GKSNSLIGMK KTLVFYRGRA PKGEKSNWVM HEFRLEGEFS YNKTIRQDAE WVVSRVFHKS 180 VAVVRGIPME NNDNDSFVDN LMIHSPSAAA PTTTLPSLKD LSPAFNQHYF LENDDNHQDF 240 KPRPVMAAAA SSSSSHGKSP YFPMLHSNYK FSLLSSANPA PPAAVLYPQN LPAPTGGFAS 300 DGLFYSAFMD NATVAKQQVN TPALKVEQTS YNNVSGSQET GLSMEVMAAN TETTSALSKL 360 KQIIVADDQS SPRPFDDLDT DPSYHDGDMD DDLDPYSFWD DDLHYGPEDP

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

METFETGKEA LVAHGDENER DKDDLLGLPP GFRFHPTDEE IILHYLLHKV SNNGFVAIAI  60
GEVDLNKVEP WDLPKKAKMG EKEWWFFCQR DRKYPTGMRT NRATESGYWK ATGKDKEIFK  120
GKSNSLIGMK KTLVFYRGRA PKGEKSNWVM HEFRLEGEFS YNKTIRQDAE WVVSRVFHKS  180
VAVVRGIPME NNDNDSFVDN LMIHSPSAAA PTTTLPSLKD LSPAFNQHYF LENDDNHQDF  240
KPRPVMAAAA SSSSSHGKSP YFPMLHSNYK FSLLSSANPA PPAAVLYPQN LPAPTGGFAS  300
DGLFYSAFMD NATVAKQQVN TPALKVEQTS YNNVSGSQET GLSMEVMAAN TETTSALSKL  360
KQIIVADDQS SPRPFDDLDT DPSYHDGDMD DDLDPYSFWD DDLHYGPEDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.1	7e-86	NAC family protein