PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157129.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 353aa MW: 39884.8 Da PI: 7.3233

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157129.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.4	1.2e-52	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yLk+k+++++l++ e ik+vdiyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_019157129.1 10 MLPGFRFHPTDEELVGFYLKRKIQQRPLPI-ELIKQVDIYKYDPWDLPKLATSGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 103 579*************************.89***********8888999***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfy+gra kg ktdW+mhe+rl XP_019157129.1 104 eGTKCIGLKKSLVFYRGRAAKGLKTDWMMHEFRL 137 56667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MDDKIIDDVM LPGFRFHPTD EELVGFYLKR KIQQRPLPIE LIKQVDIYKY DPWDLPKLAT 60 SGEKEWYFYC PRDRKYRNSA RPNRVTGAGF WKATGTDRPI YSSEGTKCIG LKKSLVFYRG 120 RAAKGLKTDW MMHEFRLPTT TPPPPNKFSG HNNFPPNDSW AICRIFKKTN SMANRANFAH 180 PWVNVLSEAS PEALLFNQFG SENMSSSSSI TPLQLSINNE LQQHFSAPPL NTNILLPTYN 240 KPASSLFSNQ SHSPSPDELP SSCSNLMVPS SSSSSSLAAS VLFDTPPTLF SPLNNTTATS 300 DHFEQSHHQH LNMDDDDDEA AVGLRNMRSM GFPFSLASEP WKQSTFSWDS PTY

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MDDKIIDDVM LPGFRFHPTD EELVGFYLKR KIQQRPLPIE LIKQVDIYKY DPWDLPKLAT  60
SGEKEWYFYC PRDRKYRNSA RPNRVTGAGF WKATGTDRPI YSSEGTKCIG LKKSLVFYRG  120
RAAKGLKTDW MMHEFRLPTT TPPPPNKFSG HNNFPPNDSW AICRIFKKTN SMANRANFAH  180
PWVNVLSEAS PEALLFNQFG SENMSSSSSI TPLQLSINNE LQQHFSAPPL NTNILLPTYN  240
KPASSLFSNQ SHSPSPDELP SSCSNLMVPS SSSSSSLAAS VLFDTPPTLF SPLNNTTATS  300
DHFEQSHHQH LNMDDDDDEA AVGLRNMRSM GFPFSLASEP WKQSTFSWDS PTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	1e-97	NAC family protein