PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019157128.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 353aa MW: 39884.8 Da PI: 7.3233 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 169.4 | 1.2e-52 | 10 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yLk+k+++++l++ e ik+vdiyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_019157128.1 10 MLPGFRFHPTDEELVGFYLKRKIQQRPLPI-ELIKQVDIYKYDPWDLPKLATSGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 103 579***************************.89***************8888999***************************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfy+gra kg ktdW+mhe+rl XP_019157128.1 104 eGTKCIGLKKSLVFYRGRAAKGLKTDWMMHEFRL 137 56667***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence |
MDDKIIDDVM LPGFRFHPTD EELVGFYLKR KIQQRPLPIE LIKQVDIYKY DPWDLPKLAT 60 SGEKEWYFYC PRDRKYRNSA RPNRVTGAGF WKATGTDRPI YSSEGTKCIG LKKSLVFYRG 120 RAAKGLKTDW MMHEFRLPTT TPPPPNKFSG HNNFPPNDSW AICRIFKKTN SMANRANFAH 180 PWVNVLSEAS PEALLFNQFG SENMSSSSSI TPLQLSINNE LQQHFSAPPL NTNILLPTYN 240 KPASSLFSNQ SHSPSPDELP SSCSNLMVPS SSSSSSLAAS VLFDTPPTLF SPLNNTTATS 300 DHFEQSHHQH LNMDDDDDEA AVGLRNMRSM GFPFSLASEP WKQSTFSWDS PTY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39820.1 | 1e-97 | NAC family protein |