PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019157013.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 305aa    MW: 33675.2 Da    PI: 8.3536
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019157013.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer105.62.9e-3354110359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     +++YkeClkNhAaslGghavDGCgEfmps++++++++ lkCaACgCHRnFHRre+ee
  XP_019157013.1  54 AATYKECLKNHAASLGGHAVDGCGEFMPSPTASSNPTLLKCAACGCHRNFHRREPEE 110
                     689***************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEVGGVGSNN IVKTPEAETE TPTRLLHHPK PLSFSSNGVL KRHNPLHHHH HHHAATYKEC  60
LKNHAASLGG HAVDGCGEFM PSPTASSNPT LLKCAACGCH RNFHRREPEE TKPTPTLEYQ  120
SLHRHHPPPP NHGSPNSLSP PPISSSAPHM LLALSTAFSG PPTDSNTPIS ASGRKRFRTK  180
FTQDQKHKML EFADKVGWKI QKRDEELINQ FCSQVGVERG VLKVWMHNNK NTHTLCKTDQ  240
SQSQSQSNAT NHIDNVNGSD FHIASRNPES QFNLHQESNG NDNHNHQPLR NSEDTIAING  300
SSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.12e-59ZF-HD family protein