PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019157007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 260aa MW: 29576.9 Da PI: 8.5713 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 177.1 | 4.7e-55 | 3 | 128 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL++kv +++++++ +i+evd ++vePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat +gyWkatgkdke+++ XP_019157007.1 3 LPPGFRFHPTDEELITYYLTPKVLDTRFSAAPAIAEVDFNSVEPWDLPWKAKMGEKEWYFFCVRDRKYPTGMRTNRATGAGYWKATGKDKEIFK- 96 79****************************999***************888999****************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 ++lvg+kktLvfykgrap+gekt Wvmhey XP_019157007.1 97 AKTLVGMKKTLVFYKGRAPRGEKTGWVMHEYY 128 999***************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MDLPPGFRFH PTDEELITYY LTPKVLDTRF SAAPAIAEVD FNSVEPWDLP WKAKMGEKEW 60 YFFCVRDRKY PTGMRTNRAT GAGYWKATGK DKEIFKAKTL VGMKKTLVFY KGRAPRGEKT 120 GWVMHEYYRL EAMHNLPKSA KNEWVICRVF KKSSGGNRIP ISGLIRGENG GKMPPLMEIS 180 ESSSHVPCFS NSVEDQKPRN SESSGTLSNH RPLIMPAELD VDSGMMMMQD HSILKLLLGN 240 NQDSEAPGAV DLDCLWNYHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39610.1 | 1e-104 | NAC family protein |