PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019157006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 279aa MW: 31662.1 Da PI: 7.2185 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 176.9 | 5.6e-55 | 3 | 128 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL++kv +++++++ +i+evd ++vePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat +gyWkatgkdke+++ XP_019157006.1 3 LPPGFRFHPTDEELITYYLTPKVLDTRFSAAPAIAEVDFNSVEPWDLPWKAKMGEKEWYFFCVRDRKYPTGMRTNRATGAGYWKATGKDKEIFK- 96 79****************************999***************888999****************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 ++lvg+kktLvfykgrap+gekt Wvmhey XP_019157006.1 97 AKTLVGMKKTLVFYKGRAPRGEKTGWVMHEYY 128 999***************************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 279 aa Download sequence |
MDLPPGFRFH PTDEELITYY LTPKVLDTRF SAAPAIAEVD FNSVEPWDLP WKAKMGEKEW 60 YFFCVRDRKY PTGMRTNRAT GAGYWKATGK DKEIFKAKTL VGMKKTLVFY KGRAPRGEKT 120 GWVMHEYYRL EAMHNLPKSA KNEWVICRVF KKSSGGNRIP ISGLIRGENG GKMPPLMEIS 180 ESSSHVPCFS NSVEDQKPRN SESSGTLSNH RPLIMPAELD VDSGMMMMQD HSILKLLLGN 240 NQDSEVGGLR PCDDDDDQHF LITSAPGAVD LDCLWNYHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G07680.2 | 1e-106 | NAC family protein |