PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019156548.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family E2F/DP
Protein Properties Length: 411aa    MW: 45754.6 Da    PI: 5.9459
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019156548.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP82.92.6e-26145210171
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     r+++sL+llt+kf++l++++e+g+++ln  a+ L   +v  ++RRiYDi+NVLe++++iek++kn++rwkg
  XP_019156548.1 145 RYDNSLGLLTKKFIQLIQEAEDGTLDLNRSADLL---EV--QKRRIYDITNVLEGVGVIEKTKKNHMRWKG 210
                     689*******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MAASGEDLDL DLNLTLSQVH LDSKAPRLVP PSCRPHHFAL IPPPHPVAVS DFRTESPPLA  60
SAQPHSAPLD VFVPKNVTGC SEADNIKTLT IQVQKTAETA NNSLLQQATF AAECRKARAT  120
KRAKYGTQGI NSDPLDSLTV AGSCRYDNSL GLLTKKFIQL IQEAEDGTLD LNRSADLLEV  180
QKRRIYDITN VLEGVGVIEK TKKNHMRWKG FETTESRELQ DQVYRLKAEV EHLYTEDQQL  240
DYCIRKKLEQ LRALESDLNC QKNLFLTEDD IMSLPRFRDQ TIIAVKAPYA SSVKVPDPCE  300
DGVFPEKHYR LIVRSTTGPI DLYLLSKKDG QHEDVNVKHA ISSDSLTGKG SGDNKMDITM  360
SSVSSDTSTL NTTKLSQIHK IMPSHASFGD DYWLCSDQVV SATELWGRED S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G47870.17e-84E2F/DP family protein