PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019156490.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ARR-B | ||||||||
Protein Properties | Length: 557aa MW: 62286.1 Da PI: 6.3523 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.2 | 1.5e-27 | 311 | 365 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH++Fv+aveqL G ++A+P++ile+mkv+gLt+++++SHLQkYR++ XP_019156490.1 311 KVKVDWTPELHKKFVQAVEQL-GLDQAIPSRILEMMKVEGLTRHNIASHLQKYRMH 365 5689*****************.********************************96 PP | |||||||
2 | Myb_DNA-binding | 45.5 | 1.7e-14 | 314 | 363 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I ++m +g+t+ ++ s++qky+ XP_019156490.1 314 VDWTPELHKKFVQAVEQLGLDqaIPSRILEMMKvEGLTRHNIASHLQKYR 363 57***********************************************7 PP | |||||||
3 | Response_reg | 30 | 2.6e-11 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT.SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg.mdGlellkeireeepklpiivvtahgeeedalealka 92 vl+ d++ + + +++ le+ +y +v ++++ eal + k +++ ++ +++++ + +++l+ + +lp i+v+ +++ +++ + XP_019156490.1 20 VLLLDEDSNSAAKMKTKLEEMDY-IVSTFQNENEALLAIASKSveFHVAIVEVNISNsNEVFKFLEIVK----DLPTILVSNVYCLNTMMKCIAL 109 799999999**************.***************888889************456666666555....588*****9999********** PP TESEEEESS--HHHHHH CS Response_reg 93 GakdflsKpfdpeelvk 109 Ga +fl Kp + ++l++ XP_019156490.1 110 GAVEFLQKPLSDDKLRN 126 **************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 557 aa Download sequence |
MLCTANDLLG WKDFPKGLSV LLLDEDSNSA AKMKTKLEEM DYIVSTFQNE NEALLAIASK 60 SVEFHVAIVE VNISNSNEVF KFLEIVKDLP TILVSNVYCL NTMMKCIALG AVEFLQKPLS 120 DDKLRNIWQH VVHKAFNAGG KDVESLKPVK ESLVSMLQLR STKNEEANTV NSDETEQSTS 180 VQENNRDTLS VCDKYPAPST PQLKQCGRSL DDGECHDQTN LSMEQDSVEH DGESKSVETT 240 YCNSVSETIP AINPPVIKQE RESSPEQAGK NGNSTCSESK DVRANANSEC RDPKKPSGVN 300 SSTGTKANKK KVKVDWTPEL HKKFVQAVEQ LGLDQAIPSR ILEMMKVEGL TRHNIASHLQ 360 KYRMHRRQIL PKEDEWRWPL SRDSTQRSCY PRKPVMAIPQ YHSAPPVVPA GQFYSAWAHP 420 GSYPGAHVWG SPYHYPGWQP TDDWNWKSNT GVYAQAWGCP VMPPPQGSYP TYPQILQNTS 480 GHHRSGGVQD RYNMLEKTYD FQPAEELIDK VVKEAINNPW LPLPLGLKPP STDSVLNELS 540 KQGISTIPPQ TNGSDLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-143 | ARR-B family protein |