PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019156479.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 333aa    MW: 35841.7 Da    PI: 9.5046
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019156479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.54.3e-31261318359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeH+h+
  XP_019156479.1 261 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHHHS 318
                     9*************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MAVELMTGYG NDGFAVKMEE SAVEEAATAG LKSVQNLIRL LSHSPECVGP ETPAAEYQTA  60
ANAAVTKFKK FISLLDRTRT GHARFRRGPV GKKVDQEPEP EPPAPEEASE KPKIYCPTPI  120
QRLPPLPHPH HHLVKNGSAA NERKESSTTI SFSAVAAAAA ASPAGSFISS LTGDTESLQP  180
SLSSGFQITN LSQVSSAGRP PLSTSSLKRK CNSMDDVTLK CGSAGGSASS RCHCPKKRKS  240
KLKRVVRVPA ISLKMADIPP DEYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA  300
LDDPTMLIVT YEGEHHHSHS ITDPPAAMIL ESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.12e-72WRKY family protein