PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019156207.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 568aa MW: 63044 Da PI: 6.5193

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019156207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.7	1.1e-09	382	419	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe n+yps++++ L++++gL+++qV++WF N R + XP_019156207.1 382 FEHflNPYPSEADKVLLSRQTGLSKNQVSNWFINARVR 419 664459******************************88 PP
2	BELL	102.1	4e-33	237	308	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 er e+q+kk kLl +leeV++rY +y+eq+ +++ssF+ v+g+g+a+pY +A+ a+SrhFrcLkd i++q+ XP_019156207.1 237 ERSEIQRKKIKLLAMLEEVEDRYVRYREQMGVMVSSFDSVMGCGAAAPYMGFAQTAMSRHFRCLKDGIVSQL 308 789******************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MSESYSQQEF YNNPCREMMM RIHGGFEGDA PPGCDDSNGG MLAEMVDNYR SAWRKSAAQV 60 LEEQIQASSY GGRSWPQKDN PLSLNQALPL MNLIHVKPSS PESNLIHQGF QVVSPLITME 120 EAHQGLSLSL KMEEFQTRNG GINNNYYTNQ ELLPLGTHFL EEPRREIEVM NVMQVRHPRY 180 LKAAQELLQE FCCLGRELHF KNGGRVKKRS GSGNPSCGDT ETGNSPAAER PPLSAAERSE 240 IQRKKIKLLA MLEEVEDRYV RYREQMGVMV SSFDSVMGCG AAAPYMGFAQ TAMSRHFRCL 300 KDGIVSQLRE TYRALGEKKQ GGVAGSYGLT KGETPRLKLL DQKLRQQKGA LNQMGMLLDS 360 EPWRPQRGLP DRSVNVLRSW LFEHFLNPYP SEADKVLLSR QTGLSKNQVS NWFINARVRL 420 WKPMVEEMYE QETKEEENAQ TPMPRDDDDD NSKEITATTS TTPTTTTTLP SAAATKRCQF 480 NATENDSSRT NIINNYAAQY AASGNQVTMI NGNTAAVPPP VSLSFAAAAA PVVDCGGGFG 540 TPATGDVSLT LGLRHPENSV TITNFGAY

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MSESYSQQEF YNNPCREMMM RIHGGFEGDA PPGCDDSNGG MLAEMVDNYR SAWRKSAAQV  60
LEEQIQASSY GGRSWPQKDN PLSLNQALPL MNLIHVKPSS PESNLIHQGF QVVSPLITME  120
EAHQGLSLSL KMEEFQTRNG GINNNYYTNQ ELLPLGTHFL EEPRREIEVM NVMQVRHPRY  180
LKAAQELLQE FCCLGRELHF KNGGRVKKRS GSGNPSCGDT ETGNSPAAER PPLSAAERSE  240
IQRKKIKLLA MLEEVEDRYV RYREQMGVMV SSFDSVMGCG AAAPYMGFAQ TAMSRHFRCL  300
KDGIVSQLRE TYRALGEKKQ GGVAGSYGLT KGETPRLKLL DQKLRQQKGA LNQMGMLLDS  360
EPWRPQRGLP DRSVNVLRSW LFEHFLNPYP SEADKVLLSR QTGLSKNQVS NWFINARVRL  420
WKPMVEEMYE QETKEEENAQ TPMPRDDDDD NSKEITATTS TTPTTTTTLP SAAATKRCQF  480
NATENDSSRT NIINNYAAQY AASGNQVTMI NGNTAAVPPP VSLSFAAAAA PVVDCGGGFG  540
TPATGDVSLT LGLRHPENSV TITNFGAY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-81	TALE family protein