PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019155945.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 348aa    MW: 38758.1 Da    PI: 4.6753
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019155945.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.4e-102743141055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     rrRR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_019155945.1 274 RRRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 314
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MEAVGAAAFF DEEWECLSKM FSPSENGDFM FLENNGAMAM ANSGHCFLSS CSDVVTNNGD  60
EFHQYFSQES SNSSGGDSFI NFPSPIYHYS LQNNDNVMMM NLVQSDEPMG FFVVDDNIVN  120
SSVPVCCHPN EVMGAADIAV CSKEEMMINS AEGHLQSAIA DDSTKNLQQL KRKPEKVAAE  180
DSSENPKKKP RVSRNAQKNK KVAVSKSKQN PESGNEDHQE DQEERNAQTS SCSSSDHQDE  240
SLELMNRDAP NSNSSGKARA SRGAATDPQS LYARRRRERI NERLRILQNL VPNGTKVDIS  300
TMLEEAVHYV KFLQLQIKLL SSEDLWMYAP IAYNGMDMGL YQKMLPSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27740.11e-35bHLH family protein