PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019155888.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 273aa    MW: 30331.8 Da    PI: 10.1355
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019155888.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.72e-0891137654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       +Er+RR+++ s +  L  l+P       ++K s ++ L+++v+Y+k+L
  XP_019155888.1  91 RDVERQRRKEMGSLYKSLVGLIPYeY---IKGKRSTSDRLQETVRYVKDL 137
                     579*********************77...*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MEQISSTFPF QDGLLHFSPI ISARQQTKPP VSDHNTNPLL VFDLLKGDVA YDVAPTMKPN  60
VILQQQHQQL QLQQKNPNNN PPHQQRKIIR RDVERQRRKE MGSLYKSLVG LIPYEYIKGK  120
RSTSDRLQET VRYVKDLRKR VEKLSAKRDE LKGVTEPPAD SSSNSLLRPA AVASSSSLIK  180
GRDECNDEQS RVTVKPCRAG VEVTVNVAAQ KIKGGGGVSL SKILKVLVGD GLSINNCCSI  240
KVNDRLLQTI EAEVIGGGSI DPTQLERKLS VLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.11e-30bHLH family protein