PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019155860.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 233aa MW: 27065.7 Da PI: 9.5462 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.1 | 6.3e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvt+skRrng++KKA+EL vLCda+v++i++s++gkl+ey+s XP_019155860.1 9 KRIENQTNRQVTYSKRRNGLFKKAHELTVLCDAKVSIIMISTSGKLHEYIS 59 79***********************************************86 PP | |||||||
2 | K-box | 90.9 | 2.4e-30 | 71 | 167 | 1 | 97 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yqk+ g++l++++ e++q++l+kL++ ++ L+re+R+++Ge+L++Ls+++L +L +++++s+k iR++K++++ +qie+ +kk ++++e++++L XP_019155860.1 71 YQKTVGVDLWNSHFEKMQEQLKKLRDVNRALRREIRQRMGEGLNDLSFEQLTELIEDVDNSIKLIRERKYKVIGNQIETHKKKVRNVEEIHRNLL 165 899999***************************************************************************************97 PP K-box 96 kk 97 + XP_019155860.1 166 LE 167 66 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MARGKIQIKR IENQTNRQVT YSKRRNGLFK KAHELTVLCD AKVSIIMIST SGKLHEYISP 60 STSTKQLFDQ YQKTVGVDLW NSHFEKMQEQ LKKLRDVNRA LRREIRQRMG EGLNDLSFEQ 120 LTELIEDVDN SIKLIRERKY KVIGNQIETH KKKVRNVEEI HRNLLLECEA RQEDPYGLVD 180 HEGDYNSVLG FPNGGPRILA LRLQPDHHHG HHHHHSHLHS GGGSDLTTFT LLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 2e-88 | MIKC_MADS family protein |