PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019155841.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 337aa MW: 37939.9 Da PI: 5.4327

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019155841.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171	3.8e-53	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g ++el evi+ vd+yk++Pw+Lp k + +++ ew+fF++rdkky++g+r+nratksgyWkatgkd++v+ XP_019155841.1 6 LPPGFRFHPTDEELVGYYLKRKTDGVEIEL-EVIPVVDLYKFDPWELPdKsFLPKRDMEWFFFCPRDKKYPNGSRTNRATKSGYWKATGKDRRVV 99 79**************************.99**********96434556788*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + ++vg +ktLvfy+grap g +tdWvmheyr+ XP_019155841.1 100 C-QPATVGYRKTLVFYRGRAPLGDRTDWVMHEYRI 133 .9999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MGGASLPPGF RFHPTDEELV GYYLKRKTDG VEIELEVIPV VDLYKFDPWE LPDKSFLPKR 60 DMEWFFFCPR DKKYPNGSRT NRATKSGYWK ATGKDRRVVC QPATVGYRKT LVFYRGRAPL 120 GDRTDWVMHE YRISDEDSHG NPSFQGPFAL CRVIKRNDVS KKTSEASGVI AASKETGSSS 180 SHAGFSSNEP IILSDDIPTQ TTFTSTESNY STPMASPYMG DYEFGMQPDT ASLWMSADMI 240 LDSSKECPQQ QSVPGFHSTQ FGFPGSTLWQ PYENHELSSS SSYSSFRGEV ELSDDPSRYG 300 CLSPYFGHGN YLGFYGNDGR PYEGYDQNSS SRNPNLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	4e-96	NAC family protein