PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019155540.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 178aa MW: 19142.4 Da PI: 5.0583 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.6e-19 | 17 | 66 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++k +g+Wv+eIr+p g ++r++lg+++t+e+Aa+a++ a+ ++g XP_019155540.1 17 VYKGVRRRK-WGKWVSEIREP---GTKTRIWLGSYDTPEMAAAAYDVAAFHFKG 66 59****998.**********8...325*********************987765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 178 aa Download sequence |
MEEPCNSAAG HSPAGGVYKG VRRRKWGKWV SEIREPGTKT RIWLGSYDTP EMAAAAYDVA 60 AFHFKGFAGV RLNFPDLVEG FPKPASSRAE DVRLAAQEAA MRFKRPPATA AAETPSGSGG 120 QAAAGLSSVR VGLSKSQIEA INETPMDSPS AIWMELGTSI EDLEGDWVEM HTDSIWDS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 19 | 25 | KGVRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G33760.1 | 6e-40 | ERF family protein |