PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019155349.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 122aa MW: 14323.8 Da PI: 11.2076 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 26.6 | 7.9e-09 | 19 | 47 | 13 | 41 |
HHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS SRF-TF 13 fskRrngilKKAeELSvLCdaevaviifs 41 s R+ g++K EL vLC++++a+i++ XP_019155349.1 19 HSTRKRGMFKTLDELTVLCGVDAAIIMYN 47 689************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence |
MARRRLRLSY NVINLKEKHS TRKRGMFKTL DELTVLCGVD AAIIMYNSFE LGPVVWPSVE 60 EAQQRIARFM NSPDVQQTRR VMSQESFVLG RIQKLSIKLL KVKKNNRERE MNALMHRIFT 120 GE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65300.1 | 1e-19 | M-type_MADS family protein |