PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019154709.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 221aa MW: 23766.8 Da PI: 7.4127 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.8 | 1.9e-20 | 118 | 152 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++ XP_019154709.1 118 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 152 ********************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 221 aa Download sequence |
MMHRCSSSCS CGMYNQSSND YSAGGFSMFF SSPPANQNYN HYYYNEEAPD YDQTLYSSSS 60 SSSVDCTLSL GTPSTRLTSA NERPPSESRR SLSSSSHKSG RGGGGGGGGA DPLVTRRCAN 120 CDTTSTPLWR NGPRGPKSLC NACGIRFKKE ERRASAAAAA AAANGGGAGG MDMMHNSWAH 180 HTQMPYNNYS SPPAYGNEYG YMEDDDRDSA FLSWRLNVHC S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G36620.1 | 2e-30 | GATA family protein |