PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019154083.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 338aa MW: 37304.9 Da PI: 8.6939 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 174 | 4.3e-54 | 16 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ XP_019154083.1 16 LPPGFRFHPTDEELVVHYLKKKAASAPLPV-AIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTA 109 79****************************.88***************988899***************************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg+kt+W+mheyrl XP_019154083.1 110 gGTQKVGVKKALVFYGGKPPKGVKTNWIMHEYRL 143 77788***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 338 aa Download sequence |
MESTDSSSGS QQQPHLPPGF RFHPTDEELV VHYLKKKAAS APLPVAIIAE VDLYKFDPWE 60 LPAKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPVLTAG GTQKVGVKKA 120 LVFYGGKPPK GVKTNWIMHE YRLADNKPNN KPPGCDINKK GSLRLDDWVL CRIYKKNNTQ 180 RPIDHERDDL NEMLGSIPPS IPTTIQFTHQ KFHQGLFKSA ANYGGLLEND QNIYEGMITS 240 NGSPIVSAAA AANLLPSKHP HHLPAMYWNE DAPTCSDSSP LTKKFLADDS HLTAARTDDQ 300 SGGGGSIATL LSQLPQQNVS GDGVFRQPYP VSGLNWYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G15510.1 | 1e-121 | NAC family protein |