PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019153771.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NF-YA | ||||||||
Protein Properties | Length: 321aa MW: 35847.7 Da PI: 9.6885 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 92.5 | 5.3e-29 | 188 | 243 | 2 | 58 |
CBFB_NFYA 2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 p++VNaKQy++I++RR+ Rak+e e+k+ + ++pylh SRh hA rRpRg+gGrF XP_019153771.1 188 GPIFVNAKQYHGIMRRRKCRAKAEMENKV-KPRKQPYLHLSRHLHATRRPRGCGGRF 243 69***************************.99************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MGFVSLTAQQ FRDYNCYSSS FSYTILYYIG AGSRKSLVQK AGKLFMTMQS VFSKEHEGIA 60 QNPMVPWWSV AQPTAYDETL GQLKDASGNH KQSEGEGALE LEQSLSKGIP PQFTVFSGNV 120 TKFPQVEATI SVQPTSTEYR GSFELGFGQS VVYAKNPYSE QCYGVYSAYG PQVAGRIMLP 180 LNLSSDEGPI FVNAKQYHGI MRRRKCRAKA EMENKVKPRK QPYLHLSRHL HATRRPRGCG 240 GRFLNTKDVK GATGSKRKRS EVGSMFDRED PEDHHRPHPI NAHLHSSLRA SPDMMMNTGH 300 DFLMAGKWMA AAADSCCNLK V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06510.2 | 5e-47 | NF-YA family protein |