PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019153414.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 473aa MW: 49952.2 Da PI: 8.9346 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.8 | 2e-05 | 56 | 78 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_019153414.1 56 FVCEICSKGFQRDQNLQLHRRGH 78 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.2 | 0.00056 | 131 | 153 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k + +s+ k H +t+ XP_019153414.1 131 FKCERCSKKYAVRSDWKAHTKTC 153 89*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 473 aa Download sequence |
MEELRNSSSM AAPSEGEPSA QLTVVSKRRR SLPGTPDPDA EVIALSPKSL LATNRFVCEI 60 CSKGFQRDQN LQLHRRGHNL PWTLKQRGGK PKRRVYVCPE TTCVHHHPSR ALGDLTGIKK 120 HFCRKHGEKK FKCERCSKKY AVRSDWKAHT KTCGTKEYRC DCGTIFSRKD SFITHRAFCD 180 ALAQETIRCQ PLEEPSKVAP PPTTTATSSS SPPPPPLTPS TGVLSPVVSV QSADLPENQS 240 GLSHHKKGTL PTVPTTIHTA CAGAGAGVPL FSTSNVNGEA LQSVFASSTV AGDSRPTQLP 300 PAPAPGSAGA SAEPMFLSLS CPIYLSGNAA SSVFPWAAAS QDLHRQYAAP SRPPPALSAT 360 ALLQKAAEIG ATSSHGSFLC GLGLATSSGS NPQDGLTKWN EHVKQENKSI SSPSSPTTMI 420 FTNNPPTLDF LGVGAGATPA SFLGSMNNSG GGGGVASTGD CWDDTSDRKF GFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03840.1 | 1e-101 | C2H2 family protein |