PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019153113.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 412aa MW: 46085.5 Da PI: 6.8341

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019153113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.9	4.8e-33	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt +LHerF+eav+qLGG++kAtPk++l+lm+++gLtl+h+kSHLQkYRl XP_019153113.1 46 KPRLKWTADLHERFIEAVNQLGGADKATPKSVLKLMGIQGLTLYHLKSHLQKYRL 100 79****************************************************8 PP
2	Myb_DNA-binding	61.6	1.6e-19	48	99	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+k++ + mg +g+tl+++ks++qky+ XP_019153113.1 48 RLKWTADLHERFIEAVNQLGGAdkaTPKSVLKLMGiQGLTLYHLKSHLQKYR 99 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MYHHHHQGRS MHPSTRMSVP PERHLFLQDG NVHGGDSGLV LSTDAKPRLK WTADLHERFI 60 EAVNQLGGAD KATPKSVLKL MGIQGLTLYH LKSHLQKYRL SKNLHLQANS GSNKTTTEGS 120 GTDKIYEANG NHMNMNNSNT VPQTNKNVHI SEAIQMQIEV QRRLHEQLEL RIEAQGKYLQ 180 AVLEKAQETL GRQNLGTMGL EAARVQISEL VSKVSNQCLN STFSEMKEVP GLGPQQARTT 240 QPTDCSLDSC LTSCEGPSRE HEMHNSQIGL GSLNLRAYMD PKEMDNETRR QQSEVRWSDE 300 LKETGKFLSG MGEDLEKAVD KETKCSDLSM SIGLEGGRWN SKKSYEFTGA DGDAKLYSRP 360 ADRSDSGKTE KQKMAQEYKL PYFGPKLDLN TEDETDVASS CKQFDLNGFS WS

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MYHHHHQGRS MHPSTRMSVP PERHLFLQDG NVHGGDSGLV LSTDAKPRLK WTADLHERFI  60
EAVNQLGGAD KATPKSVLKL MGIQGLTLYH LKSHLQKYRL SKNLHLQANS GSNKTTTEGS  120
GTDKIYEANG NHMNMNNSNT VPQTNKNVHI SEAIQMQIEV QRRLHEQLEL RIEAQGKYLQ  180
AVLEKAQETL GRQNLGTMGL EAARVQISEL VSKVSNQCLN STFSEMKEVP GLGPQQARTT  240
QPTDCSLDSC LTSCEGPSRE HEMHNSQIGL GSLNLRAYMD PKEMDNETRR QQSEVRWSDE  300
LKETGKFLSG MGEDLEKAVD KETKCSDLSM SIGLEGGRWN SKKSYEFTGA DGDAKLYSRP  360
ADRSDSGKTE KQKMAQEYKL PYFGPKLDLN TEDETDVASS CKQFDLNGFS WS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.1	1e-123	G2-like family protein