PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152885.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family G2-like
Protein Properties Length: 278aa    MW: 29909.7 Da    PI: 6.7819
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152885.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.46.7e-334094155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kprlrWt +LH+rFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl
  XP_019152885.1 40 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 94
                    79****************************************************8 PP
2Myb_DNA-binding67.62.2e-214293148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT+++++++vdav++lGg+   t+k++ r mg kg+tl+++ks++qky+
   XP_019152885.1 42 RLRWTADLHDRFVDAVTKLGGPdkaTPKSVLRLMGlKGLTLYHLKSHLQKYR 93
                     89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MVMDGMYGGG GGGGGAGGSC YSYGDGGGGG GGVMMTRDPK PRLRWTADLH DRFVDAVTKL  60
GGPDKATPKS VLRLMGLKGL TLYHLKSHLQ KYRLGQQGKK QNAGDQNKEN SGDSCRQFSI  120
HSSATSTPSS SMNCMQGEIP FGDAVRCQIE VQNILQEQLE VQKKLQMRIE AQGKYLQAIL  180
EKAQKSLSID MNSPSSVEAT RAQLSDFNLA LSSFMESMNG ESIGKAMDAN LPSSDFLGEE  240
EEDDKRDINI KLHGGLMNFD LNCGSSHDFV AGKLTNGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45580.18e-71G2-like family protein