PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152832.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 518aa MW: 56783.8 Da PI: 6.7526

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	32.1	2e-10	363	395	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 n+yps+++++ L++++gL+++qV++WF N R + XP_019152832.1 363 NPYPSEADKQVLSRQTGLSKNQVSNWFINARVR 395 9******************************88 PP
2	BELL	100.4	1.4e-32	215	285	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e+q++k kLls+l+eVd rY +y eq+qt+++sFe v+g+g+a+pYt lA+ a+SrhFr +kd i++q+ XP_019152832.1 215 RSEHQNRKIKLLSMLDEVDARYVRYSEQMQTMVNSFELVVGYGAAAPYTGLAQEAMSRHFRRIKDGIVGQL 285 689*****************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MIRIQEFELL EASVGGEAPA TYDSGGGMLS EMIPSSSLRM LKFPGGGNNS SLESSFVDQG 60 LHQYNTWIPA PDSSRIGTVM EVQGLSLSLS SSMEAAKLEE LSSRNGGIYS NNITGSADQL 120 LLHSGGVDVA GYGGGVAAAA ESTRTVNVLR NSRYLKAAQG LLEEFCFVGR GKLKNLIRAK 180 KNMMNSDESG NPNSDHEHDG DPPPPPPPSS SPAVRSEHQN RKIKLLSMLD EVDARYVRYS 240 EQMQTMVNSF ELVVGYGAAA PYTGLAQEAM SRHFRRIKDG IVGQLRETCK VLGEKDDGVG 300 GRRGLTRGET PRLRFIDQKL RHQKALHQMA MGMFDSEFWT PQRGLPQPSV NTLRAWLFDH 360 FLNPYPSEAD KQVLSRQTGL SKNQVSNWFI NARVRLWKPM VEEMYQQEAK EEGDNAKDSQ 420 LIAEEKDPSH NIIVSSENQP MTLDSSILPN HGDKSLLPVT GFSLKAPDSW SAGAGAGNGG 480 FGAVAQVTRD VSLTLGLQRI ENLSRNNRIP IKDFRAYN

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MIRIQEFELL EASVGGEAPA TYDSGGGMLS EMIPSSSLRM LKFPGGGNNS SLESSFVDQG  60
LHQYNTWIPA PDSSRIGTVM EVQGLSLSLS SSMEAAKLEE LSSRNGGIYS NNITGSADQL  120
LLHSGGVDVA GYGGGVAAAA ESTRTVNVLR NSRYLKAAQG LLEEFCFVGR GKLKNLIRAK  180
KNMMNSDESG NPNSDHEHDG DPPPPPPPSS SPAVRSEHQN RKIKLLSMLD EVDARYVRYS  240
EQMQTMVNSF ELVVGYGAAA PYTGLAQEAM SRHFRRIKDG IVGQLRETCK VLGEKDDGVG  300
GRRGLTRGET PRLRFIDQKL RHQKALHQMA MGMFDSEFWT PQRGLPQPSV NTLRAWLFDH  360
FLNPYPSEAD KQVLSRQTGL SKNQVSNWFI NARVRLWKPM VEEMYQQEAK EEGDNAKDSQ  420
LIAEEKDPSH NIIVSSENQP MTLDSSILPN HGDKSLLPVT GFSLKAPDSW SAGAGAGNGG  480
FGAVAQVTRD VSLTLGLQRI ENLSRNNRIP IKDFRAYN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-103	TALE family protein