PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152749.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 638aa MW: 71027 Da PI: 5.3649

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	2e-09	423	460	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +qV +WF N R + XP_019152749.1 423 FEHflHPYPKDSEKIMLARQTGLTRSQVANWFINARVR 460 554459******************************88 PP
2	BELL	119.2	1.8e-38	289	360	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 er++l++k++kL s+l+eVd+rYkqy++q+q+v+ssFe+v+glg+a+pYt+lAl++iS +FrcL+dai++qi XP_019152749.1 289 ERHDLESKITKLFSMLDEVDRRYKQYYQQMQAVVSSFEMVTGLGAARPYTALALRTISCQFRCLRDAIKKQI 360 799********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MATYFSSLSD QRDDLPMPLM PNEKHSSYHQ SSGLPDNLMY LNHPYPELSS GSSLPAHNNY 60 GEAQSIRTRD EMLFIPPTSD PATMQPIGRL PNVGSSFSGV NSTPVEPHTY SSKPFDAQSV 120 EQNLQYQGLS LSLAMQVPGS VQVPGYHDQY TNPGFPSLMS THDNENKSAE YLSFDLAGAQ 180 NNVKIGGSGN LDRSMSLREM NFNPQIHDVP GVAAGSIYNS KYLKAAQDLL DEVVNVHTAL 240 KQSEKPHNLH PFGQDEEADM KSSCSGTGMS SDGHKSSTNT SSGELSAAER HDLESKITKL 300 FSMLDEVDRR YKQYYQQMQA VVSSFEMVTG LGAARPYTAL ALRTISCQFR CLRDAIKKQI 360 QVARQSLGEQ GNSQGERLYR LRFVDQQLRQ QRSLQQFGMM RQPWRPQRGL PENAVSVLRA 420 WLFEHFLHPY PKDSEKIMLA RQTGLTRSQV ANWFINARVR LWKPMIEDMY KEEFGDPEGD 480 LAASPEPITG AKEKSVSDDR GDEELHESLT SIPQSNDLRS NVVPNEERNN MTLARLGFQD 540 TTTHENERGD LNEGIIAGTS AYGVSVFRGM MGNQVSLALG LQHNQNDPQP PTATSLIGGD 600 DDKPASSMDI GKPDYYYIDP ANQQERFASS HILPDFVV

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MATYFSSLSD QRDDLPMPLM PNEKHSSYHQ SSGLPDNLMY LNHPYPELSS GSSLPAHNNY  60
GEAQSIRTRD EMLFIPPTSD PATMQPIGRL PNVGSSFSGV NSTPVEPHTY SSKPFDAQSV  120
EQNLQYQGLS LSLAMQVPGS VQVPGYHDQY TNPGFPSLMS THDNENKSAE YLSFDLAGAQ  180
NNVKIGGSGN LDRSMSLREM NFNPQIHDVP GVAAGSIYNS KYLKAAQDLL DEVVNVHTAL  240
KQSEKPHNLH PFGQDEEADM KSSCSGTGMS SDGHKSSTNT SSGELSAAER HDLESKITKL  300
FSMLDEVDRR YKQYYQQMQA VVSSFEMVTG LGAARPYTAL ALRTISCQFR CLRDAIKKQI  360
QVARQSLGEQ GNSQGERLYR LRFVDQQLRQ QRSLQQFGMM RQPWRPQRGL PENAVSVLRA  420
WLFEHFLHPY PKDSEKIMLA RQTGLTRSQV ANWFINARVR LWKPMIEDMY KEEFGDPEGD  480
LAASPEPITG AKEKSVSDDR GDEELHESLT SIPQSNDLRS NVVPNEERNN MTLARLGFQD  540
TTTHENERGD LNEGIIAGTS AYGVSVFRGM MGNQVSLALG LQHNQNDPQP PTATSLIGGD  600
DDKPASSMDI GKPDYYYIDP ANQQERFASS HILPDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-101	TALE family protein