PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019152457.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 25588.2 Da PI: 5.1825 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.9 | 6.2e-19 | 59 | 108 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++GVr++ +g+WvAeIr+p + r +r++lg+f t eAa+a++ a+++l+g XP_019152457.1 59 TFRGVRQRT-WGKWVAEIREP---N-RgARVWLGTFNTSLEAARAYDDAARRLYG 108 69****999.**********8...3.35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MEESSGDSTI NVRVPIGKEG GAVTGKPANT APPVKKSNVG RSRKGCMRGK GGPENALCTF 60 RGVRQRTWGK WVAEIREPNR GARVWLGTFN TSLEAARAYD DAARRLYGPS AKLNLLDDTF 120 SSLSSSSPGS TGGAGFNIGD DHYLSSSPGS SATATSEMSE GKEWYAEECS VLDEASVFRD 180 RDGKYLLWET PAPSLLDEEQ NRGWPEFPKD NNGFHCADGT EINIDMGAGV RVPPWSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18450.1 | 4e-40 | ERF family protein |