PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019152455.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 214aa MW: 25081.5 Da PI: 7.0634 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 51.6 | 3.2e-16 | 4 | 137 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpkkvkaeekewyfFskrdkkya..tgkrknra.......tksgyWka 85 p G rF+P d +++ ++L + v+g+++ +e+ i++ d++ + ePw+L +++k yf ++ +kk++ +g+r +r+ k g+W+ XP_019152455.1 4 PLGARFQPFDYDVL-KFLFNFVTGRSCVDDEAlIHQEDVFgEKEPWELV---PSGKKMAYFLTRLKKKAKsmKGSRVQRTvgrkmkgKKPGTWHG 94 88**********99.99*********6666666****987356*****4...45677889998877766644688888866777766679***** PP NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + k+v ++ ++ l+g k+++ + ++++ + +W+++e+ l XP_019152455.1 95 QDIGKAVADEhGRFLMGYKRSFLYK-NKSEAEQDGKWLLKEFYL 137 ********984455699****9887.5666669********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MEIPLGARFQ PFDYDVLKFL FNFVTGRSCV DDEALIHQED VFGEKEPWEL VPSGKKMAYF 60 LTRLKKKAKS MKGSRVQRTV GRKMKGKKPG TWHGQDIGKA VADEHGRFLM GYKRSFLYKN 120 KSEAEQDGKW LLKEFYLSET MIRRVRAEFP IVEERADFVL CRIERKKKDD DEDDDNDEED 180 DEITLEQGGT NNNLSEAIVS VPVPWIHYWH RRIT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 64 | 70 | LKKKAKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.1 | 9e-07 | NAC family protein |