PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152440.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 313aa    MW: 34779.2 Da    PI: 4.6028
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152440.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.91.5e-07200244655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++ r RR+ri ++ +eL +l+P       +K++ ae+ + A +YIk +q
  XP_019152440.1 200 SIAARERRRRITEKTQELGKLIPGG-----QKMNTAEMFQAAYKYIKFMQ 244
                     677899*****************86.....7****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MASLSYCSNW GTVHDQHLNF CETLDGSAVM ASPPFFAQPQ MVDDDQLEAP AAELLFGLNN  60
HAFVLPESAV SPFDPVFNSG EFIFSDNYVS PPPPPPPEYS IPQEVEFQTH PKRQKLYHDH  120
FPEITQNCFG VFIPNPPLLQ DLNPPPPPPP PPPSSESVLP MFPELPAAPI PAYCGCAESE  180
VAVKKNDNGN CSAKTLSAQS IAARERRRRI TEKTQELGKL IPGGQKMNTA EMFQAAYKYI  240
KFMQTQLSVL QSCHHSSQET GETFMNEELE SLVGSSLIQE KLYSNDKCLV PEEFVHSLPN  300
GHELYQLYQA NKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.11e-23bHLH family protein