PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152013.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 344aa MW: 39961.8 Da PI: 7.7418

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	29.3	1.9e-09	1	23	33	55
G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55 ++lm+++ +t +h+kSHLQkYRl XP_019152013.1 1 MRLMDIEQITTDHIKSHLQKYRL 23 789*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MRLMDIEQIT TDHIKSHLQK YRLNGSKQAN TNTRKSKKCF HEFSGELFKL LNSKHEEHST 60 YKALYNIILN FRTMETAIRA TVFQRHQEHK YSITPGLHTM GSIQVSDVPE ISTERQRTSQ 120 TKLEQFERAQ QQVQYIEREY HGTLKQTSNN EKRQYPQVEE MELTTEQLDE QRKMAQKDHI 180 SILNSDPLSS PMESTNYIEP DYVGTTYSTL EIERKNFLKP SYKRCLEAHK EKGKFPYTSA 240 RTDDRELIIP EKKRFDAAPL KISLQMEKGS TSSGFSADET HERGKCYQVY ASPTSAAQIE 300 AQNMVAVDNK INMSNFPSYK DLKAMNASNE KSFDLNMPAK EQEE

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MRLMDIEQIT TDHIKSHLQK YRLNGSKQAN TNTRKSKKCF HEFSGELFKL LNSKHEEHST  60
YKALYNIILN FRTMETAIRA TVFQRHQEHK YSITPGLHTM GSIQVSDVPE ISTERQRTSQ  120
TKLEQFERAQ QQVQYIEREY HGTLKQTSNN EKRQYPQVEE MELTTEQLDE QRKMAQKDHI  180
SILNSDPLSS PMESTNYIEP DYVGTTYSTL EIERKNFLKP SYKRCLEAHK EKGKFPYTSA  240
RTDDRELIIP EKKRFDAAPL KISLQMEKGS TSSGFSADET HERGKCYQVY ASPTSAAQIE  300
AQNMVAVDNK INMSNFPSYK DLKAMNASNE KSFDLNMPAK EQEE