PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152010.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 371aa MW: 42778.1 Da PI: 9.376

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152010.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	92.9	2.6e-29	28	82	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr +Wt + H rFv+av+qLGG+ kAtPk+i++lm+++ +t +h+kSHLQkYRl XP_019152010.1 28 KPRFKWTVQVHGRFVDAVNQLGGIYKATPKNIMRLMDIEQITTDHIKSHLQKYRL 82 79****************************************************8 PP
2	Myb_DNA-binding	34.5	4.9e-11	32	81	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 +WT + + ++vdav+qlGg t+k I+r m + t ++ks++qky+ XP_019152010.1 32 KWTVQVHGRFVDAVNQLGGIykaTPKNIMRLMDiEQITTDHIKSHLQKYR 81 799999**********88**********99***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MMSTPGRNET KNEKNGQEVK QSLSGVRKPR FKWTVQVHGR FVDAVNQLGG IYKATPKNIM 60 RLMDIEQITT DHIKSHLQKY RLNGSKQANT NTRKSKKCFH EFSAIRATVF QRHQEHKYSI 120 TPGLHTMGSI QVSDVPEIST ERQRTSQTKL EQFERAQQQV QYIEREYHGT LKQTSNNEKR 180 QYPQVEEMEL TTEQLDEQRK MAQKDHISIL NSDPLSSPME STNYIEPDYV GTTYSTLEIE 240 RKNFLKPSYK RCLEAHKEKG KFPYTSARTD DRELIIPEKK RFDAAPLKIS LQMEKGSTSS 300 GFSADETHER GKCYQVYASP TSAAQIEAQN MVAVDNKINM SNFPSYKDLK AMNASNEKSF 360 DLNMPAKEQE E

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MMSTPGRNET KNEKNGQEVK QSLSGVRKPR FKWTVQVHGR FVDAVNQLGG IYKATPKNIM  60
RLMDIEQITT DHIKSHLQKY RLNGSKQANT NTRKSKKCFH EFSAIRATVF QRHQEHKYSI  120
TPGLHTMGSI QVSDVPEIST ERQRTSQTKL EQFERAQQQV QYIEREYHGT LKQTSNNEKR  180
QYPQVEEMEL TTEQLDEQRK MAQKDHISIL NSDPLSSPME STNYIEPDYV GTTYSTLEIE  240
RKNFLKPSYK RCLEAHKEKG KFPYTSARTD DRELIIPEKK RFDAAPLKIS LQMEKGSTSS  300
GFSADETHER GKCYQVYASP TSAAQIEAQN MVAVDNKINM SNFPSYKDLK AMNASNEKSF  360
DLNMPAKEQE E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18240.1	2e-22	G2-like family protein