PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152009.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 401aa MW: 46386.2 Da PI: 9.3276

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	92.8	2.9e-29	28	82	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr +Wt + H rFv+av+qLGG+ kAtPk+i++lm+++ +t +h+kSHLQkYRl XP_019152009.1 28 KPRFKWTVQVHGRFVDAVNQLGGIYKATPKNIMRLMDIEQITTDHIKSHLQKYRL 82 79****************************************************8 PP
2	Myb_DNA-binding	34.3	5.4e-11	32	81	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 +WT + + ++vdav+qlGg t+k I+r m + t ++ks++qky+ XP_019152009.1 32 KWTVQVHGRFVDAVNQLGGIykaTPKNIMRLMDiEQITTDHIKSHLQKYR 81 799999**********88**********99***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MMSTPGRNET KNEKNGQEVK QSLSGVRKPR FKWTVQVHGR FVDAVNQLGG IYKATPKNIM 60 RLMDIEQITT DHIKSHLQKY RLNGSKQANT NTRKSKKCFH EFSGELFKLL NSKHEEHSTY 120 KALYNIILNF RTMETAIRAT VFQRHQEHKY SITPGLHTMG IQVSDVPEIS TERQRTSQTK 180 LEFERAQQQV QYIEREYHGT LKQTSNNEKR QYPQVEEMEL TTEQLDEQRK MAQKDHISIL 240 NSDPLSSPME STNYIEPDYV GTTYSTLEIE RKNFLKPSYK RCLEAHKEKG KFPYTSARTD 300 DRELIIPEKK RFDAAPLKIS LQMEKGSTSS GFSADETHER GKCYQVYASP TSAAQIEAQN 360 MVAVDNKINM SNFPSYKDLK AMNASNEKSF DLNMPAKEQE E

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MMSTPGRNET KNEKNGQEVK QSLSGVRKPR FKWTVQVHGR FVDAVNQLGG IYKATPKNIM  60
RLMDIEQITT DHIKSHLQKY RLNGSKQANT NTRKSKKCFH EFSGELFKLL NSKHEEHSTY  120
KALYNIILNF RTMETAIRAT VFQRHQEHKY SITPGLHTMG IQVSDVPEIS TERQRTSQTK  180
LEFERAQQQV QYIEREYHGT LKQTSNNEKR QYPQVEEMEL TTEQLDEQRK MAQKDHISIL  240
NSDPLSSPME STNYIEPDYV GTTYSTLEIE RKNFLKPSYK RCLEAHKEKG KFPYTSARTD  300
DRELIIPEKK RFDAAPLKIS LQMEKGSTSS GFSADETHER GKCYQVYASP TSAAQIEAQN  360
MVAVDNKINM SNFPSYKDLK AMNASNEKSF DLNMPAKEQE E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18240.2	7e-20	G2-like family protein