PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152008.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 402aa MW: 46503.3 Da PI: 9.2027

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152008.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	83.2	2.9e-26	28	81	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr +Wt + H rFv+av+qLGG+ +tPk+i++lm+++ +t +h+kSHLQkYRl XP_019152008.1 28 KPRFKWTVQVHGRFVDAVNQLGGIY-TTPKNIMRLMDIEQITTDHIKSHLQKYRL 81 79*******************98.9*************************8 PP
2	Myb_DNA-binding	34.5	4.8e-11	32	80	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 +WT + + ++vdav+qlGg t+k I+r m + t ++ks++qky+ XP_019152008.1 32 KWTVQVHGRFVDAVNQLGGIytTPKNIMRLMDiEQITTDHIKSHLQKYR 80 799999**********88*********99***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MMSTPGRNET KNEKNGQEVK QSLSGVRKPR FKWTVQVHGR FVDAVNQLGG IYTTPKNIMR 60 LMDIEQITTD HIKSHLQKYR LNGSKQANTN TRKSKKCFHE FSGELFKLLN SKHEEHSTYK 120 ALYNIILNFR TMETAIRATV FQRHQEHKYS ITPGLHTMGS IQVSDVPEIS TERQRTSQTK 180 LEQFERAQQQ VQYIEREYHG TLKQTSNNEK RQYPQVEEME LTTEQLDEQR KMAQKDHISI 240 LNSDPLSSPM ESTNYIEPDY VGTTYSTLEI ERKNFLKPSY KRCLEAHKEK GKFPYTSART 300 DDRELIIPEK KRFDAAPLKI SLQMEKGSTS SGFSADETHE RGKCYQVYAS PTSAAQIEAQ 360 NMVAVDNKIN MSNFPSYKDL KAMNASNEKS FDLNMPAKEQ EE

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MMSTPGRNET KNEKNGQEVK QSLSGVRKPR FKWTVQVHGR FVDAVNQLGG IYTTPKNIMR  60
LMDIEQITTD HIKSHLQKYR LNGSKQANTN TRKSKKCFHE FSGELFKLLN SKHEEHSTYK  120
ALYNIILNFR TMETAIRATV FQRHQEHKYS ITPGLHTMGS IQVSDVPEIS TERQRTSQTK  180
LEQFERAQQQ VQYIEREYHG TLKQTSNNEK RQYPQVEEME LTTEQLDEQR KMAQKDHISI  240
LNSDPLSSPM ESTNYIEPDY VGTTYSTLEI ERKNFLKPSY KRCLEAHKEK GKFPYTSART  300
DDRELIIPEK KRFDAAPLKI SLQMEKGSTS SGFSADETHE RGKCYQVYAS PTSAAQIEAQ  360
NMVAVDNKIN MSNFPSYKDL KAMNASNEKS FDLNMPAKEQ EE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.2	9e-19	G2-like family protein