PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019151892.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 243aa MW: 26416.7 Da PI: 8.367 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.9 | 0.00017 | 85 | 107 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ Cg++F++ L H +H XP_019151892.1 85 YECKTCGRTFPTFQALGGHRTSH 107 99**********99998888777 PP | |||||||
2 | zf-C2H2 | 15 | 7.3e-05 | 165 | 187 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_019151892.1 165 HECSYCGAEFSSGQALGGHMRRH 187 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MTPPHSSATP EPIPAAPTPE DEDMARCLML LSQGGGVSRH PPAIPKSPLY KEEESGGGSK 60 FCSKKYIETT TVGGGGGVKV GMYVYECKTC GRTFPTFQAL GGHRTSHTKE KPPLTTVETA 120 AVKRPLSLYD EEDINPYPFN KTPKISPPFS SLHFYDSAKS SPRIHECSYC GAEFSSGQAL 180 GGHMRRHRNS TAASQLSPSS SSFEKRVLQK EENNGKGLNL DLNLLPAGED NQDHRRAREP 240 IVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04390.1 | 9e-29 | C2H2 family protein |