PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019151863.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 203aa MW: 22050.6 Da PI: 7.1644 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.3 | 5.7e-05 | 122 | 144 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_019151863.1 122 HECSYCGAEFSSGQALGGHMRRH 144 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MITDTTPPHS SATSEPIPAA PTPEDEDMAR CLMLLSQGGG VSRHPPAIPK SPLYKEEESG 60 CGSKFCSKKP LTTVEAAAVK RPLSLYDEED INPYPFNKTP KISPPFSSLH FYDSAKSSPR 120 THECSYCGAE FSSGQALGGH MRRHRNSTAA TAASQLSPSS SSFEKRVLQK EENNGKGLNL 180 DLNLLPAGED NQDHRRAREP IVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28200.1 | 4e-17 | C2H2 family protein |