PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019151822.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 203aa MW: 23195.1 Da PI: 8.4643 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 79.1 | 3e-25 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien rqvtf+kRr+g+lKKA+ELSvLCdae+ + ifs +gklye + XP_019151822.1 9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELA 58 79*********************************************965 PP | |||||||
2 | K-box | 57.3 | 6.9e-20 | 85 | 176 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++++ ++e+ Lk+eie Lqr +R + G + +++++ eL+ Le+ Le + +iRs K+++++++i+ l++ke l +nk L++k++e XP_019151822.1 85 ANDNQLLDPKEEIGMLKNEIEVLQRGLRFMYGGGAGTMTVDELHALEKYLEVWMYQIRSAKMDIMFQEIQLLKNKEGILTAANKHLKEKIDE 176 55666667799******************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MARGKIQMKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGLFIFSA HGKLYELATQ 60 GTMQGLIEKY LKCTRGADDQ VADEANDNQL LDPKEEIGML KNEIEVLQRG LRFMYGGGAG 120 TMTVDELHAL EKYLEVWMYQ IRSAKMDIMF QEIQLLKNKE GILTAANKHL KEKIDEQCRT 180 ANIAPMLTNI QCPLTIQNKI YQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 1e-83 | MIKC_MADS family protein |