PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019151515.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Nin-like

Protein Properties

Length: 940aa MW: 103422 Da PI: 5.9842

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019151515.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.5	3.2e-29	594	645	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_019151515.1 594 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 645 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 940 aa Download sequence
MPEPDGTAPP PRSRELLTPL PQSAAAASDR ELLTMDLDLE FSWTFDQIFA AAAASNPAPP 60 FLFSASEQPC SPLWVFSDDN DDAPAGNAAR LSDYSRLISY AGDLDAITEG VSGKDDKRRL 120 PPPVLGSTAK DYLDISCKIK ERISQALRYF KEWTGEHVLA QVWAPVKSGG RYVLTTLGQP 180 FVLDPNSNGL HQYRMVSLKY MFSVDGETDG DLGLPGRVFR QKLPEWTPNV QYYSSKEFPR 240 LSHALDYNVQ GTLALPIFEP SGQSCVGVLE LIMTSQKINY APEVDKVCKA LEAVNLRSSE 300 ILDHPGVQIC NEGRQTALAE ILEILTVVCE NYKLPLAQTW VPCRHRSVLA DGGGLKKSCS 360 SFDGSCMGQV CMSTTDLAFY VVDARMWYFR EACVEHHLQK GQGVAGRAFA SQRSCFCEDI 420 TQFCKTEYPL VHYARMFGLT SCFAICLRST DTGNDDYILE FFLPPRAGNY SDQHTLLSSL 480 LLTMKQHFRT LRVASGDDIE HELGSIEIIK TKMEEKLDLS PESVSLSKST FTQPTKITDA 540 QFCPDTVGDQ KLTAGLNATN DGADRREPFD TQNHASLAGK KDVGKKSVRK RGKAEKSISL 600 EVLQQYFAGS LKDAAKSLGV CPTTMKRICR QHGISRWPSR KINKVNRSLS KLKRVIESVH 660 GAEGAFTLTN LATNSIPVAV GSISWPATVN DSNQHTSPRS RPSESPKEKN AFFNHNAPGY 720 QDDTEPSNQI LGGQVLGNEL APQQNGFAVG EGSNRSRTGS GSGEESTGTP TSHFSCQEQP 780 QEAFGGMLIE DAGSSHNLRN LCSAGENPFD ERMPECSWTH PPCSVAVPVR PDRVPQYPAR 840 PELTTITIKA TYREDIIRFR LPLSSGIIKL TEEVSKRLKL EVGTFDIKYL DDDHEWVLIA 900 CDADLQECID ISRSSGSTII RLLVHDIMPH LGSSCESSGG

Sequence ? help Back to Top

Protein Sequence Length: 940 aa Download sequence

MPEPDGTAPP PRSRELLTPL PQSAAAASDR ELLTMDLDLE FSWTFDQIFA AAAASNPAPP  60
FLFSASEQPC SPLWVFSDDN DDAPAGNAAR LSDYSRLISY AGDLDAITEG VSGKDDKRRL  120
PPPVLGSTAK DYLDISCKIK ERISQALRYF KEWTGEHVLA QVWAPVKSGG RYVLTTLGQP  180
FVLDPNSNGL HQYRMVSLKY MFSVDGETDG DLGLPGRVFR QKLPEWTPNV QYYSSKEFPR  240
LSHALDYNVQ GTLALPIFEP SGQSCVGVLE LIMTSQKINY APEVDKVCKA LEAVNLRSSE  300
ILDHPGVQIC NEGRQTALAE ILEILTVVCE NYKLPLAQTW VPCRHRSVLA DGGGLKKSCS  360
SFDGSCMGQV CMSTTDLAFY VVDARMWYFR EACVEHHLQK GQGVAGRAFA SQRSCFCEDI  420
TQFCKTEYPL VHYARMFGLT SCFAICLRST DTGNDDYILE FFLPPRAGNY SDQHTLLSSL  480
LLTMKQHFRT LRVASGDDIE HELGSIEIIK TKMEEKLDLS PESVSLSKST FTQPTKITDA  540
QFCPDTVGDQ KLTAGLNATN DGADRREPFD TQNHASLAGK KDVGKKSVRK RGKAEKSISL  600
EVLQQYFAGS LKDAAKSLGV CPTTMKRICR QHGISRWPSR KINKVNRSLS KLKRVIESVH  660
GAEGAFTLTN LATNSIPVAV GSISWPATVN DSNQHTSPRS RPSESPKEKN AFFNHNAPGY  720
QDDTEPSNQI LGGQVLGNEL APQQNGFAVG EGSNRSRTGS GSGEESTGTP TSHFSCQEQP  780
QEAFGGMLIE DAGSSHNLRN LCSAGENPFD ERMPECSWTH PPCSVAVPVR PDRVPQYPAR  840
PELTTITIKA TYREDIIRFR LPLSSGIIKL TEEVSKRLKL EVGTFDIKYL DDDHEWVLIA  900
CDADLQECID ISRSSGSTII RLLVHDIMPH LGSSCESSGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	0.0	Nin-like family protein