PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019150675.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 464aa MW: 51529.8 Da PI: 7.6749 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.1 | 4.7e-14 | 28 | 72 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W++eEd++l + ++++G+++W+ Ia+++ +t qc+ rw++yl XP_019150675.1 28 SWSQEEDDILREQIRLHGTENWTIIASKFK-DKTTRQCRRRWFTYL 72 6****************************9.*************97 PP | |||||||
2 | Myb_DNA-binding | 42.7 | 1.3e-13 | 78 | 121 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a + +G++ W+ Ia+ + gRt++ +k+r+ + XP_019150675.1 78 KGGWSPEEDVLLCEAQRIFGNR-WTEIAKVVS-GRTDNAVKNRFTT 121 688*******************.*********.**********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 464 aa Download sequence |
MQNMKKKVSN GNGNSNEASK PKERHIVSWS QEEDDILREQ IRLHGTENWT IIASKFKDKT 60 TRQCRRRWFT YLNSDFKKGG WSPEEDVLLC EAQRIFGNRW TEIAKVVSGR TDNAVKNRFT 120 TLCKKRAKNE ALAKENNNSF INLNNKRVIF PGAGSPFKKL RRSHISDLPE NCNSGEKSLV 180 TCNAVNQLQR SPFSVLPNVG SSLPTNQNVS IKDSPTNGKY FIEIEGTFLK KDDPKILALM 240 QQAELLSSLA LKVNSENSHQ SLENAWKVLQ DFLNQKEDDV LKGRISEMDF KGLAEDLKNI 300 NVPSQSWRQP ALSEDSAGSS EYSSESTLLS HAPGDKKEQC EAEVSALHQD IESGLQSTEI 360 GDRTTINAFS GGTPANATCT EADILPTCDK VGANEEAAAE ECSSPLHVTP LFRTLAAAIP 420 SPKFSESERQ FLLKTLGMDC TSPKSSINNT SHPPSCKRVL LHSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14350.1 | 1e-136 | MYB family protein |