PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019149694.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 435aa MW: 48430.8 Da PI: 4.4589

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019149694.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	145.8	2.4e-45	6	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+++yLk+kv+g+k e++++i+e++i + Pw+Lp k ++++ ewyfF++ +kkya+g+r +ra ++g+Wkatg+d++v+ XP_019149694.1 6 LPPGFRFHPTDEELIMYYLKRKVTGRKlhSEAKRAIPELNIRLYAPWELPGKSRSKDLEWYFFCPIEKKYASGSRMKRANETGFWKATGNDRTVT 100 79***********************64445567***********88889999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 kg++vg ktL+f++g+a kg +tdWv+heyr+ XP_019149694.1 101 Y-KGRTVGKIKTLIFHQGHAGKGIRTDWVIHEYRM 134 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MANTTLPPGF RFHPTDEELI MYYLKRKVTG RKLHSEAKRA IPELNIRLYA PWELPGKSRS 60 KDLEWYFFCP IEKKYASGSR MKRANETGFW KATGNDRTVT YKGRTVGKIK TLIFHQGHAG 120 KGIRTDWVIH EYRMEDKHLA DARIVQDSYV ICKVFEKTGS GPKNGSQYGR PFIEEDWDND 180 DVCAEPDLSG VSPAMPAPTD CQSCPVGIES TSNFTLVEPG PSSAEPGSSL AEPHINELPE 240 DADMIELLCP FFMEENGLLP IESNNNKNMS DLNQARSVEI AACNDGDDIY NGLGGLDNLP 300 TLDEDGFCNT RNPWEETTAY YGDSDAYINQ ARSVEVSECN DGDDMFNILG YLGNLPTTGE 360 DGFPNMTMAA AAGYVELDDL LKPLDESNCG SETQHLYPFY NNVEQSHIRG NTTSGSNPVA 420 AEENIHPKPK GYNSW

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MANTTLPPGF RFHPTDEELI MYYLKRKVTG RKLHSEAKRA IPELNIRLYA PWELPGKSRS  60
KDLEWYFFCP IEKKYASGSR MKRANETGFW KATGNDRTVT YKGRTVGKIK TLIFHQGHAG  120
KGIRTDWVIH EYRMEDKHLA DARIVQDSYV ICKVFEKTGS GPKNGSQYGR PFIEEDWDND  180
DVCAEPDLSG VSPAMPAPTD CQSCPVGIES TSNFTLVEPG PSSAEPGSSL AEPHINELPE  240
DADMIELLCP FFMEENGLLP IESNNNKNMS DLNQARSVEI AACNDGDDIY NGLGGLDNLP  300
TLDEDGFCNT RNPWEETTAY YGDSDAYINQ ARSVEVSECN DGDDMFNILG YLGNLPTTGE  360
DGFPNMTMAA AAGYVELDDL LKPLDESNCG SETQHLYPFY NNVEQSHIRG NTTSGSNPVA  420
AEENIHPKPK GYNSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	2e-67	NAC family protein