PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019149684.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB_related | ||||||||
Protein Properties | Length: 277aa MW: 30913.9 Da PI: 9.9497 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.8 | 3.7e-11 | 44 | 88 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+ E++++++a +++ + Wk+I + + +t q++s+ qky XP_019149684.1 44 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVA-SKTVIQIRSHAQKY 88 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MALQNTGSFS KQTPAVAANS NAPSLSDDDP TKKVRKPYTI SKSRESWTEP EHDKFLEALQ 60 LFDRDWKKIE AFVASKTVIQ IRSHAQKYFQ KVQKSGTNEH LPPPRPKRKA AHPYPQKASK 120 SGASQVPTSV QGPAALPDAE MARNSVFLPI IRATSASLPS RTDNSMQAGS DLESTDRPLT 180 DTHCWSSNKN SSAELTNKRA HGNSLRVLPD FNEVYNFIGS IFDPNVSGHL QKLKKMDRID 240 VETVLLLMRN LTINLMNPDF ENHKKLLSSY EVDGKEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.2 | 2e-84 | MYB_related family protein |