PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021301164.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

BES1

Protein Properties

Length: 673aa MW: 75929 Da PI: 5.8445

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021301164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	165.4	3.4e-51	61	199	1	134
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspessl 94 +g+g+++++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+reAGw+ve+DGttyr +p+ +++++ g++ +s+es+l XP_021301164.1 61 TGKGKREREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWTVEPDGTTYRLRHSPPpQHHQHLGAFPVRSVESPL 155 5899****************************************************************55555559*************** PP DUF822 95 q.sslkssalaspvesysaspksssfpspssldsislasa...a 134 + sslks+++++ ++ + ++ + ++++sp+slds+ +a+ + XP_021301164.1 156 SaSSLKSCSVKATLDCQPPVVRIDESLSPASLDSVVIAERdtrS 199 9**********************************9885542 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MQNPQSSTNA NQDPTIEPQP QPQPQPRRPR GFAAAAAAAA ASVSPTGTPS GTAAASTGSS 60 TGKGKREREK EKERTKLRER HRRAITSRML AGLRQYGNFP LPARADMNDV LAALAREAGW 120 TVEPDGTTYR LRHSPPPQHH QHLGAFPVRS VESPLSASSL KSCSVKATLD CQPPVVRIDE 180 SLSPASLDSV VIAERDTRSE KYPSTSPIDS VECLEADQLI QDVHSREHEN DFTGTQYVPV 240 YIKLSTGVIN NFCQLADPEG VRQELSHMKS LNVDGVVVDC WWGIVEGWNP QKYVWSGYRE 300 LFNVIREFKM KIQVVMAFHE YARTDTAEVV ISLPQWILEI GKENQDIFFT DREGRRTTEC 360 LSWGIDKERV LNGRTGIEVY FDFMRNFRTE FDDLFAEGLF SAVEIGLGPS GELRYPSFSE 420 RMGWRYPGIG EFQCYDKYLQ QNLRKAAKLR GHSFWARGPD NTGQYNSQPH ETGFFCERGD 480 YDSYYGRFFL HWYAQSLTDH ADNVLSLASL AFEETKIIVK VPAIYWWYKT SSHAAELTAG 540 YYNPTNQDGY SPVFEVLKKH SVTIKFVCSG LQVCSYESDE AFADPEGLSW QVLNSAWDRG 600 LTVAGENTLS CFDREGCLRI SETAKPRNDP DHRHFSFFVY QQPSPLVEGV ICFLDLDYFI 660 KCMHGDITGD LVP

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MQNPQSSTNA NQDPTIEPQP QPQPQPRRPR GFAAAAAAAA ASVSPTGTPS GTAAASTGSS  60
TGKGKREREK EKERTKLRER HRRAITSRML AGLRQYGNFP LPARADMNDV LAALAREAGW  120
TVEPDGTTYR LRHSPPPQHH QHLGAFPVRS VESPLSASSL KSCSVKATLD CQPPVVRIDE  180
SLSPASLDSV VIAERDTRSE KYPSTSPIDS VECLEADQLI QDVHSREHEN DFTGTQYVPV  240
YIKLSTGVIN NFCQLADPEG VRQELSHMKS LNVDGVVVDC WWGIVEGWNP QKYVWSGYRE  300
LFNVIREFKM KIQVVMAFHE YARTDTAEVV ISLPQWILEI GKENQDIFFT DREGRRTTEC  360
LSWGIDKERV LNGRTGIEVY FDFMRNFRTE FDDLFAEGLF SAVEIGLGPS GELRYPSFSE  420
RMGWRYPGIG EFQCYDKYLQ QNLRKAAKLR GHSFWARGPD NTGQYNSQPH ETGFFCERGD  480
YDSYYGRFFL HWYAQSLTDH ADNVLSLASL AFEETKIIVK VPAIYWWYKT SSHAAELTAG  540
YYNPTNQDGY SPVFEVLKKH SVTIKFVCSG LQVCSYESDE AFADPEGLSW QVLNSAWDRG  600
LTVAGENTLS CFDREGCLRI SETAKPRNDP DHRHFSFFVY QQPSPLVEGV ICFLDLDYFI  660
KCMHGDITGD LVP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.1	0.0	BES1 family protein