PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021300768.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | GRAS | ||||||||
Protein Properties | Length: 946aa MW: 102446 Da PI: 11.6907 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 438.5 | 4.9e-134 | 156 | 522 | 1 | 370 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l+++L++cA+avs++dl +aq+l+ +l+ ++s +g+p+qRl ay++e+L arla+s+s++ykal+++e + s++ l+++++++ev+P++kf++ XP_021300768.1 156 LKQVLVSCAKAVSDNDLMMAQWLMDELRRMVSVSGEPIQRLGAYMLEGLVARLASSGSSIYKALRCKEPA---SADLLSYMHILYEVCPYFKFGY 247 5799*****************************************************************9...9********************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 + aN aI ea++ e+rvHiiDf+i+qG QW++L+qa+a+Rp+gpp++ iTg+++++s + l+ +g+rL+k+Ae+++vpfef++ +a + + XP_021300768.1 248 MSANGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHICITGIDDSTSAyaRGGGLNIVGKRLSKLAEHFKVPFEFHA-AAMSGCE 341 ******************************************************998899999************************.899999* PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 ++ e+Lrv+pgEalaVn++++lh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F+ rfle+l yy+a+f+s++++lpr+ +eri XP_021300768.1 342 VQQEHLRVRPGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFFPRFLETLIYYTAMFESIDVTLPRDRKERI 436 *********************************************************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370 +vE+++l+r++vn++aceg er+erhe ++kWr+r+++aGF p+pls+ +++++k+ll+++ + yr+ee++g+l+lgW + Lv+ XP_021300768.1 437 NVEQHCLARDVVNIIACEGPERVERHELMGKWRSRFRMAGFCPYPLSSLVNATIKTLLENYCD-KYRLEERDGALYLGWIEWDLVAS 522 *************************************************************95.5**************99999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 946 aa Download sequence |
MASRLYHQVK QEVEPYCLPQ FPTIDRSFCY SDSSQGSHFS VKNSCELYCT LESSSANGSY 60 TVYNSSSTVS FSPNGSPMSQ QESQSYPSDL HHSPDNTYGS PISGSCITDD VSDLRHKLRE 120 LETAMLGPDS DIIDSTTSPN MGSWSLVMDA ISRGDLKQVL VSCAKAVSDN DLMMAQWLMD 180 ELRRMVSVSG EPIQRLGAYM LEGLVARLAS SGSSIYKALR CKEPASADLL SYMHILYEVC 240 PYFKFGYMSA NGAIAEAMKD EDRVHIIDFQ IGQGSQWITL IQAFAARPGG PPHICITGID 300 DSTSAYARGG GLNIVGKRLS KLAEHFKVPF EFHAAAMSGC EVQQEHLRVR PGEALAVNFA 360 FMLHHMPDES VSTENHRDRL LRLVKSLSPK VVTLVEQESN TNTAPFFPRF LETLIYYTAM 420 FESIDVTLPR DRKERINVEQ HCLARDVVNI IACEGPERVE RHELMGKWRS RFRMAGFCPY 480 PLSSLVNATI KTLLENYCDK YRLEERDGAL YLGWIEWDLV ASCGHGVIQH NNFYSRSIFW 540 PAFAQSCRFA VALLYAGWKE RRMHARWGAG GGHPARRAPG ASRAAAGAPR PPPAAGSRGH 600 GGLAADRRAP AAPQRPARRP RPAARSGRPP RRDAHAARAG TRRRGRPDQR TGGPPRRGGR 660 GEPRPRTGRR AGRPAARSAR PPPSAPAERP ARAKRGAPAR GQPARPPPPA RAGRPAARRS 720 GLRPPPAAAR PAFPRRRQGH PAPSPARAPR PRLARPRPRR AAPPAPAAGA PGRAPDPPGA 780 GPGGRDAARP ARPGPAAGRR GPTPARPPRA GRARGGRPPP RADRGASAAD VGEPARDGSH 840 GAGARERARG RGAGRRPGQR PRAAGPAAAP PRPARRPAAR PARGRAPAPG TGPRARPQSA 900 AARPRAAPAP PAAARAPRAG ARPGARARRA RPRRRSEPRR RAPPQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |