PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021300768.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family GRAS
Protein Properties Length: 946aa    MW: 102446 Da    PI: 11.6907
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021300768.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS438.54.9e-1341565221370
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+++L++cA+avs++dl +aq+l+ +l+ ++s +g+p+qRl ay++e+L arla+s+s++ykal+++e +   s++ l+++++++ev+P++kf++
  XP_021300768.1 156 LKQVLVSCAKAVSDNDLMMAQWLMDELRRMVSVSGEPIQRLGAYMLEGLVARLASSGSSIYKALRCKEPA---SADLLSYMHILYEVCPYFKFGY 247
                     5799*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI ea++ e+rvHiiDf+i+qG QW++L+qa+a+Rp+gpp++ iTg+++++s   +   l+ +g+rL+k+Ae+++vpfef++ +a +  +
  XP_021300768.1 248 MSANGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHICITGIDDSTSAyaRGGGLNIVGKRLSKLAEHFKVPFEFHA-AAMSGCE 341
                     ******************************************************998899999************************.899999* PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ e+Lrv+pgEalaVn++++lh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F+ rfle+l yy+a+f+s++++lpr+ +eri
  XP_021300768.1 342 VQQEHLRVRPGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFFPRFLETLIYYTAMFESIDVTLPRDRKERI 436
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                     +vE+++l+r++vn++aceg er+erhe ++kWr+r+++aGF p+pls+ +++++k+ll+++ +  yr+ee++g+l+lgW +  Lv+ 
  XP_021300768.1 437 NVEQHCLARDVVNIIACEGPERVERHELMGKWRSRFRMAGFCPYPLSSLVNATIKTLLENYCD-KYRLEERDGALYLGWIEWDLVAS 522
                     *************************************************************95.5**************99999986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 946 aa     Download sequence    
MASRLYHQVK QEVEPYCLPQ FPTIDRSFCY SDSSQGSHFS VKNSCELYCT LESSSANGSY  60
TVYNSSSTVS FSPNGSPMSQ QESQSYPSDL HHSPDNTYGS PISGSCITDD VSDLRHKLRE  120
LETAMLGPDS DIIDSTTSPN MGSWSLVMDA ISRGDLKQVL VSCAKAVSDN DLMMAQWLMD  180
ELRRMVSVSG EPIQRLGAYM LEGLVARLAS SGSSIYKALR CKEPASADLL SYMHILYEVC  240
PYFKFGYMSA NGAIAEAMKD EDRVHIIDFQ IGQGSQWITL IQAFAARPGG PPHICITGID  300
DSTSAYARGG GLNIVGKRLS KLAEHFKVPF EFHAAAMSGC EVQQEHLRVR PGEALAVNFA  360
FMLHHMPDES VSTENHRDRL LRLVKSLSPK VVTLVEQESN TNTAPFFPRF LETLIYYTAM  420
FESIDVTLPR DRKERINVEQ HCLARDVVNI IACEGPERVE RHELMGKWRS RFRMAGFCPY  480
PLSSLVNATI KTLLENYCDK YRLEERDGAL YLGWIEWDLV ASCGHGVIQH NNFYSRSIFW  540
PAFAQSCRFA VALLYAGWKE RRMHARWGAG GGHPARRAPG ASRAAAGAPR PPPAAGSRGH  600
GGLAADRRAP AAPQRPARRP RPAARSGRPP RRDAHAARAG TRRRGRPDQR TGGPPRRGGR  660
GEPRPRTGRR AGRPAARSAR PPPSAPAERP ARAKRGAPAR GQPARPPPPA RAGRPAARRS  720
GLRPPPAAAR PAFPRRRQGH PAPSPARAPR PRLARPRPRR AAPPAPAAGA PGRAPDPPGA  780
GPGGRDAARP ARPGPAAGRR GPTPARPPRA GRARGGRPPP RADRGASAAD VGEPARDGSH  840
GAGARERARG RGAGRRPGQR PRAAGPAAAP PRPARRPAAR PARGRAPAPG TGPRARPQSA  900
AARPRAAPAP PAAARAPRAG ARPGARARRA RPRRRSEPRR RAPPQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein