PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021300709.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | Nin-like | ||||||||
Protein Properties | Length: 269aa MW: 29590.2 Da PI: 8.4725 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 66.5 | 4.2e-21 | 14 | 60 | 2 | 48 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 +++s++d++ +Fslp+ dAA++ gvc+++LK+iCR++G++RWPhRk XP_021300709.1 14 AQSLSFDDIADFFSLPLYDAASTFGVCASALKKICRENGLDRWPHRK 60 5799******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence |
MMSLQQQNSS SAAAQSLSFD DIADFFSLPL YDAASTFGVC ASALKKICRE NGLDRWPHRK 60 FLAGKSIEEI KRHAAREKRK ELTELSKVHR QGSQTQNNEL SKLQGATALP NLQQQGAKNI 120 QTGQALNFGH RSLMTGMTTS DEFKYGFPSD GLSITTNKWW GGSKSDGHED VHVDGAETEG 180 EDKHQCVEKP GDMANEKLEE NGKLDDGIGP QGSGLLTAVR KRAVEEGREA LKLGVYKGYG 240 IKKLGRREAS LLLQIFKSSL QKDWIHGPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76350.1 | 1e-09 | Nin-like family protein |