PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021300708.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family Nin-like
Protein Properties Length: 270aa    MW: 29677.3 Da    PI: 8.4725
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021300708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK66.54.2e-211460248
          RWP-RK  2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48
                     +++s++d++ +Fslp+ dAA++ gvc+++LK+iCR++G++RWPhRk
  XP_021300708.1 14 AQSLSFDDIADFFSLPLYDAASTFGVCASALKKICRENGLDRWPHRK 60
                    5799******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MMSLQQQNSS SAAAQSLSFD DIADFFSLPL YDAASTFGVC ASALKKICRE NGLDRWPHRK  60
FLAGKSIEEI KRHAAREKRK ELTELSKVHR QGSSQTQNNE LSKLQGATAL PNLQQQGAKN  120
IQTGQALNFG HRSLMTGMTT SDEFKYGFPS DGLSITTNKW WGGSKSDGHE DVHVDGAETE  180
GEDKHQCVEK PGDMANEKLE ENGKLDDGIG PQGSGLLTAV RKRAVEEGRE ALKLGVYKGY  240
GIKKLGRREA SLLLQIFKSS LQKDWIHGPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76350.11e-09Nin-like family protein