PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021300044.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Nin-like

Protein Properties

Length: 882aa MW: 96419.2 Da PI: 5.7939

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021300044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.2	3.9e-29	476	526	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_021300044.1 476 EKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 526 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 882 aa Download sequence
MPSSFLGLLP LENPDSYCVI KERMTQALRY FKDSTEQHVL AQVWAPIKSG GRYMLTTSGQ 60 PFVLDPHSNG LHQYRMVSLM YMFSVDGESD GQLGLPGRVF RQKLPEWTPN VQYYSSKEYS 120 RLDHALHYNV RGTLALPVFE PSGQSCVGVL ELIMTSQKIN YAPEVDKVCK ALEAVNLKSS 180 DILDPPSTQI CNENRQNALA KILEILTVVC ETYKLPLAQT WVPCRHRSVL AYGGGLKKSC 240 TSFDGSCMGQ VCMSTTDVAF YVVDAHMWGF REACLEHHLQ KGQGVAGRAF LSRNSCFCAD 300 ITQFCKTEYP LVHYARMFRL TSCFAICLQS SYTGDDDYVL EFFLPPAIAD SNEQQTLLGS 360 ILATMKQHFQ SLKVASGAEL EEDEGSIEII EAFSDETLDS RLESIPIPPS VKSPPVPNTS 420 PNRGELQLDS SKQQLIVTFD PATDGGNVVA SGSQNPVCLP QNKDVKKSER KRGKTEKSIS 480 LEVLQQYFAG SLKDAAKSLG VCPTTMKRIC RQHGISRWPS RKINKVNRSL TKLKHVIESV 540 QGADGAFGLT SIATSPLPVA VGSISWPTSL NGSNQQNSPN SKPSDAQGEK YDLPTCRTPV 600 SNGQALVEDQ LLAGRTLSQE LFPQQNGPSP DLNKGANRSK TGSGSREESA GTPTSHGSCQ 660 GSPAIESAAT KDPLSSIQEQ CFKARGSPEL AFQPLGELNI PATFSMPEAL VATEPQEPFG 720 GMLVEDAGSS KDLRNLCPSA ADVGIDERFP ESSWTPPPCT DLALKQAMAA FTQTTPHVTA 780 RQEVRSVTIK ATYREDIIRF RISLSSGIVE LKEEVAKRLK LEVGTFDVKY LDDDSEWVLI 840 ACDADLQECL DVSRSSGRNI IRLSVHDAMA NLGSSCESTG EL

Sequence ? help Back to Top

Protein Sequence Length: 882 aa Download sequence

MPSSFLGLLP LENPDSYCVI KERMTQALRY FKDSTEQHVL AQVWAPIKSG GRYMLTTSGQ  60
PFVLDPHSNG LHQYRMVSLM YMFSVDGESD GQLGLPGRVF RQKLPEWTPN VQYYSSKEYS  120
RLDHALHYNV RGTLALPVFE PSGQSCVGVL ELIMTSQKIN YAPEVDKVCK ALEAVNLKSS  180
DILDPPSTQI CNENRQNALA KILEILTVVC ETYKLPLAQT WVPCRHRSVL AYGGGLKKSC  240
TSFDGSCMGQ VCMSTTDVAF YVVDAHMWGF REACLEHHLQ KGQGVAGRAF LSRNSCFCAD  300
ITQFCKTEYP LVHYARMFRL TSCFAICLQS SYTGDDDYVL EFFLPPAIAD SNEQQTLLGS  360
ILATMKQHFQ SLKVASGAEL EEDEGSIEII EAFSDETLDS RLESIPIPPS VKSPPVPNTS  420
PNRGELQLDS SKQQLIVTFD PATDGGNVVA SGSQNPVCLP QNKDVKKSER KRGKTEKSIS  480
LEVLQQYFAG SLKDAAKSLG VCPTTMKRIC RQHGISRWPS RKINKVNRSL TKLKHVIESV  540
QGADGAFGLT SIATSPLPVA VGSISWPTSL NGSNQQNSPN SKPSDAQGEK YDLPTCRTPV  600
SNGQALVEDQ LLAGRTLSQE LFPQQNGPSP DLNKGANRSK TGSGSREESA GTPTSHGSCQ  660
GSPAIESAAT KDPLSSIQEQ CFKARGSPEL AFQPLGELNI PATFSMPEAL VATEPQEPFG  720
GMLVEDAGSS KDLRNLCPSA ADVGIDERFP ESSWTPPPCT DLALKQAMAA FTQTTPHVTA  780
RQEVRSVTIK ATYREDIIRF RISLSSGIVE LKEEVAKRLK LEVGTFDVKY LDDDSEWVLI  840
ACDADLQECL DVSRSSGRNI IRLSVHDAMA NLGSSCESTG EL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein