PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021299839.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 303aa    MW: 32843 Da    PI: 6.4069
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021299839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.91.8e-32163220259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+
  XP_021299839.1 163 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTTVITTYEGQHCHH 220
                     8******************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MENKEGADPR NEFTSDSSWT LPGPDPVSDS VNYFFDRESS ILSEFGWNLQ PDQAEEIERF  60
GELDRTETRP DLAGNFSGSQ SSGAGAAAAG SGSGTASNPS GSADVSTSNP SVSSSSSEDP  120
PEKSTGSGGK PPEIPSKVRK KGQKRIRQPR FAFVTKSEVD HLEDGYRWRK YGQKAVKNSP  180
FPRSYYRCTN SKCTVKKRVE RSSEDPTTVI TTYEGQHCHH SVGFPRGGLV SHEAAFAGQL  240
TPAVSQFYYP GVQLHREIPP SITQSHQVPI DVGGSRALPE PTPQLPTDEG LLGDIVPPGM  300
RNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.23e-65WRKY family protein